RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 NMNAT3Q96T66 252 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 AUNIPQ9H7T9 357 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 PSENENQ9NZ42 101 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 RABAC1Q9UI14 185 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 DHRS7CA6NNS2 312 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FOXD2O60548 495 aaPredicted RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 GYPBP06028 91 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 OR2B11Q5JQS5 317 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 NHLRC1Q6VVB1 395 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FIZ1Q96SL8 496 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 IZUMO4Q1ZYL8 232 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 GRASPQ7Z6J2 395 aaPredicted RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 MENTQ9BUN1 341 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 DCDP81605 110 aaKnown RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 TMEM123Q8N131 208 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 MORN4Q8NDC4 146 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 IL21Q9HBE4 155 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 YARS2Q9Y2Z4 477 aaKnown RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 NTSR1P30989 418 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FOXA1P55317 472 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 MEF2BQ02080 365 aaPredicted RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 CIRBPQ14011 172 aaKnown RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 PRSS3P2Q8NHM4 247 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 BOCQ9BWV1 1114 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FAM72CH0Y354 149 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 SLC19A1P41440 591 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 DGCR2P98153 550 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FAM72AQ5TYM5 149 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FAM72DQ6L9T8 149 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FAM72BQ86X60 149 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 OR8B3Q8NGG8 313 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 AQP10Q96PS8 301 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 OR2T8A6NH00 312 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 LIPNQ5VXI9 398 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 LAIR1Q6GTX8 287 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 FAM109BQ6ICB4 259 aaPredicted RBP7.24□□□□□ -1.25
HTT-201ENST00000355072 TCF23Q7RTU1 214 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 PDPNQ86YL7 162 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 OR52N4Q8NGI2 321 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 OR5D18Q8NGL1 313 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 DCAF16Q9NXF7 216 aa7.24□□□□□ -1.25
HTT-201ENST00000355072 MPGP29372 298 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 HMGA2P52926 109 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
HTT-201ENST00000355072 SMUG1Q53HV7 270 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 OR2I1PQ8NGU4 316 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 RBKSQ9H477 322 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 C9orf170A2RU37 121 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 MBD3L1Q8WWY6 194 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 GPX5O75715 221 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 ACVRL1P37023 503 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 TNFSF10P50591 281 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 ZDHHC23Q8IYP9 409 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 MOB4Q9Y3A3 225 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 H3BQ15 152 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SLC25A6P12236 298 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SLC37A1P57057 533 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 DHRS13Q6UX07 377 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 RPS27LQ71UM5 84 aaKnown RBP7.23□□□□□ -1.25
HTT-201ENST00000355072 COL5A3P25940 1745 aaPredicted RBP7.23□□□□□ -1.25
HTT-201ENST00000355072 PMS2P1A4D2B8 440 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 FAM209BQ5JX69 171 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 LYSMD4Q5XG99 296 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 ST6GAL2Q96JF0 529 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SMPD2O60906 423 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 ZNF385BQ569K4 471 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 C9orf135Q5VTT2 229 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 PARS2Q7L3T8 475 aaKnown RBP7.23□□□□□ -1.25
HTT-201ENST00000355072 RHBDD1Q8TEB9 315 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 MIXL1Q9H2W2 232 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 TMED7-TICAM2A0A0A6YYA0 188 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 ODAMA1E959 279 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SHC1P29353 583 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 PPP1R3CQ9UQK1 317 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 FRMPD3Q5JV73 1810 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 C19orf67A6NJJ6 358 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 DCTDP32321 178 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 CRYBB2P43320 205 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 TMEM30BQ3MIR4 351 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 LRP10Q7Z4F1 713 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SPNS2Q8IVW8 549 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 MRGPRX3Q96LB0 322 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 RTP3Q9BQQ7 232 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 TMEM30AQ9NV96 361 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 ORM2P19652 201 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 LY6G5CQ5SRR4 150 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 MORN1Q5T089 497 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 FBXW5Q969U6 566 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 SEC22AQ96IW7 307 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 ADOQ96SZ5 270 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 CLN8Q9UBY8 286 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 V9GYH0 126 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 RER1O15258 196 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 LINC00518Q8N0U6 118 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 PLA2G12AQ9BZM1 189 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 FRG2CA6NGY1 282 aa7.23□□□□□ -1.25
HTT-201ENST00000355072 HEPACAM2A8MVW5 462 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms