RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 AHSA1O95433 338 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 OPN1MWP04001 364 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 OPN1MW2P0DN77 364 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 OPN1MW3P0DN78 364 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 CCR2P41597 374 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 POLR2HP52434 150 aaKnown RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 RPL23AP62750 156 aaKnown RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 SAPCD1Q5SSQ6 148 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 FAM90A2PQ658T7 463 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 P4HA3Q7Z4N8 544 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 MRPL41Q8IXM3 137 aaKnown RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 C1orf147Q96MC9 270 aaPredicted RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 VSTM2LQ96N03 204 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 LYRM4Q9HD34 91 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 CHST11Q9NPF2 352 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 GPR173Q9NS66 373 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 PILRAQ9UKJ1 303 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 POLR3KQ9Y2Y1 108 aaPredicted RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 PCNX3Q9H6A9 2034 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 HTTP42858 3142 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 FAM230AA0A1W2PPH8 454 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 CA11O75493 328 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 IRF2P14316 349 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 ALDH3B1P43353 468 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 PDLIM4P50479 330 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 ZFP36L1Q07352 338 aaKnown RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 PNRC1Q12796 327 aaPredicted RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 IL13RA2Q14627 380 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 CBLN3Q6UW01 205 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 SPRED2Q7Z698 418 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 REEP6Q96HR9 211 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 TMEM59Q9BXS4 323 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 GAB2Q9UQC2 676 aa6.91□□□□□ -1.3
CD46-203ENST00000354848 MRPS28Q9Y2Q9 187 aaKnown RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 MRPS23Q9Y3D9 190 aaKnown RBP6.91□□□□□ -1.3
CD46-203ENST00000354848 LINC01553A4QN01 128 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 IGLON5A6NGN9 336 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 ETV2O00321 342 aaPredicted RBP6.9□□□□□ -1.3
CD46-203ENST00000354848 APBB3O95704 486 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 ZNF10P21506 573 aaPredicted RBP6.9□□□□□ -1.3
CD46-203ENST00000354848 CTGFP29279 349 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 ELLP55199 621 aaPredicted RBP6.9□□□□□ -1.3
CD46-203ENST00000354848 EWSR1Q01844 656 aaKnown RBP eCLIP6.9□□□□□ -1.31e-6■■□□□ 12.9
CD46-203ENST00000354848 ACKR1Q16570 336 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 SP6Q3SY56 376 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 CHRFAM7AQ494W8 412 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 ZNF705AQ6ZN79 300 aaPredicted RBP6.9□□□□□ -1.3
CD46-203ENST00000354848 ARHGEF39Q8N4T4 335 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 SLC26A10Q8NG04 563 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 OR52M1Q8NGK5 317 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 OR5L2Q8NGL0 311 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 OR2AJ1Q8NGZ0 328 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 STT3BQ8TCJ2 826 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 NEK7Q8TDX7 302 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 SPOCK3Q9BQ16 436 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 ZNF2Q9BSG1 426 aaPredicted RBP6.9□□□□□ -1.3
CD46-203ENST00000354848 FOXQ1Q9C009 403 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 S1PR5Q9H228 398 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 MBNL1Q9NR56 388 aaKnown RBP6.9□□□□□ -1.3
CD46-203ENST00000354848 WNT6Q9Y6F9 365 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 SPACA6W5XKT8 324 aa6.9□□□□□ -1.3
CD46-203ENST00000354848 FAM221AA4D161 298 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 KLF8O95600 359 aaPredicted RBP6.9□□□□□ -1.31
CD46-203ENST00000354848 SCGB1D1O95968 90 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 CTSDP07339 412 aaPredicted RBP6.9□□□□□ -1.31
CD46-203ENST00000354848 CD55P08174 381 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 DBHP09172 617 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 IFI6P09912 130 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 BRS3P32247 399 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 OR3A4PP47883 348 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 RAB11AP62491 216 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 SGCGQ13326 291 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 ZNF266Q14584 549 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 CD226Q15762 336 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 C1orf189Q5VU69 101 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 CHRDL2Q6WN34 429 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 ZNF66Q6ZN08 573 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 LYZL2Q7Z4W2 148 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 LINC00346Q8IVM7 164 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 FBXL14Q8N1E6 418 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 FAM160A2Q8N612 972 aaPredicted RBP6.9□□□□□ -1.31
CD46-203ENST00000354848 BCORP1Q8N888 145 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 OR5D14Q8NGL3 314 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 OR14L1PQ8NHC6 308 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 KCNG3Q8TAE7 436 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 RBMXL1Q96E39 390 aaKnown RBP6.9□□□□□ -1.31
CD46-203ENST00000354848 BOD1Q96IK1 185 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 KLHDC3Q9BQ90 382 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 VN1R1Q9GZP7 353 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 GPR84Q9NQS5 396 aa6.9□□□□□ -1.31
CD46-203ENST00000354848 COA3Q9Y2R0 106 aaPredicted RBP6.9□□□□□ -1.31
CD46-203ENST00000354848 IFNL4K9M1U5 179 aa6.89□□□□□ -1.31
CD46-203ENST00000354848 TTRP02766 147 aa6.89□□□□□ -1.31
CD46-203ENST00000354848 CT45A8P0DMV1 189 aa6.89□□□□□ -1.31
CD46-203ENST00000354848 CT45A9P0DMV2 189 aa6.89□□□□□ -1.31
CD46-203ENST00000354848 MMP9P14780 707 aa6.89□□□□□ -1.31
CD46-203ENST00000354848 SELEP16581 610 aa6.89□□□□□ -1.31
CD46-203ENST00000354848 ZNF43P17038 809 aa6.89□□□□□ -1.31
CD46-203ENST00000354848 RPL27P61353 136 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms