RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 REEP6Q96HR9 211 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 SHANK1Q9Y566 2161 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 SERPINE3A8MV23 424 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 LRP3O75074 770 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 TLNRD1Q9H1K6 362 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 PMS2P1A4D2B8 440 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 FOXI3A8MTJ6 420 aaPredicted RBP17.06■□□□□ 0.32
COL13A1-201ENST00000354547 FGF16O43320 207 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 FARS2O95363 451 aaKnown RBP17.06■□□□□ 0.32
COL13A1-201ENST00000354547 ID4P47928 161 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 POC1AQ8NBT0 407 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 OR4A4PQ8NGN8 299 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 NAT6Q93015 286 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 PCDHB16Q9NRJ7 776 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 IGKV1-27A0A075B6S5 117 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 CEACAM18A8MTB9 384 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 IGLV3-1P01715 115 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 RBM39Q14498 530 aaKnown RBP17.06■□□□□ 0.32
COL13A1-201ENST00000354547 ZNF239Q16600 458 aaKnown RBP17.06■□□□□ 0.32
COL13A1-201ENST00000354547 AKIRIN2Q53H80 203 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 PLXDC2Q6UX71 529 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 CLRN3Q8NCR9 226 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 LIME1Q9H400 295 aa17.06■□□□□ 0.32
COL13A1-201ENST00000354547 ZNF629Q9UEG4 869 aaPredicted RBP17.06■□□□□ 0.32
COL13A1-201ENST00000354547 NXT1Q9UKK6 140 aaKnown RBP17.06■□□□□ 0.32
COL13A1-201ENST00000354547 A0A087WZY1 265 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 OR5H8P0DN80 308 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 FGF5P12034 268 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 FKBP2P26885 142 aaKnown RBP17.05■□□□□ 0.32
COL13A1-201ENST00000354547 OTX2P32243 289 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 PIGYQ3MUY2 71 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 H3F3CQ6NXT2 135 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 RPUSD3Q6P087 351 aaKnown RBP17.05■□□□□ 0.32
COL13A1-201ENST00000354547 LDLRAD3Q86YD5 345 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 GHRLQ9UBU3 117 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 AK3Q9UIJ7 227 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 RAB19A4D1S5 217 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 MSTNO14793 375 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 CXCL13O43927 109 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 VAMP5O95183 116 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 FAM157CP0CG43 387 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 SGPP2Q8IWX5 399 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 MRPL24Q96A35 216 aaKnown RBP17.05■□□□□ 0.32
COL13A1-201ENST00000354547 WDR54Q9H977 334 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 PCDHGA1Q9Y5H4 931 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 FIGNL2A6NMB9 653 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 RFPL3SP0C7P2 107 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 ZNF32P17041 273 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 HTR5AP47898 357 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 PHLDA2Q53GA4 152 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 HAGHLQ6PII5 290 aaPredicted RBP17.05■□□□□ 0.32
COL13A1-201ENST00000354547 AGBL5Q8NDL9 886 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 CNTNAP3BQ96NU0 1288 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 CMSS1Q9BQ75 279 aaKnown RBP17.05■□□□□ 0.32
COL13A1-201ENST00000354547 SLC5A7Q9GZV3 580 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 TAF9BQ9HBM6 251 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 FOXD3Q9UJU5 478 aaPredicted RBP17.05■□□□□ 0.32
COL13A1-201ENST00000354547 PILRBQ9UKJ0 227 aa17.05■□□□□ 0.32
COL13A1-201ENST00000354547 LOC102723996A0A087X1L8 192 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 MED6O75586 246 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 PDGFBP01127 241 aaPredicted RBP17.04■□□□□ 0.32
COL13A1-201ENST00000354547 EXT1Q16394 746 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 Q96M66 194 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 AIFM2Q9BRQ8 373 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 METTL9Q9H1A3 318 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 SAV1Q9H4B6 383 aaPredicted RBP17.04■□□□□ 0.32
COL13A1-201ENST00000354547 PADI1Q9ULC6 663 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 PRRC2CQ9Y520 2896 aaKnown RBP17.04■□□□□ 0.32
COL13A1-201ENST00000354547 GEMIN2O14893 280 aaKnown RBP17.04■□□□□ 0.32
COL13A1-201ENST00000354547 CD79AP11912 226 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 CARD18P57730 90 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 RAC1P63000 192 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 IL11RAQ14626 422 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 SVBPQ8N300 66 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 FNDC9Q8TBE3 224 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 C1orf123Q9NWV4 160 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 ANXA10Q9UJ72 324 aa17.04■□□□□ 0.32
COL13A1-201ENST00000354547 ONECUT2O95948 504 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 OTX1P32242 354 aaPredicted RBP17.03■□□□□ 0.32
COL13A1-201ENST00000354547 RGS19P49795 217 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 SCRN3Q0VDG4 424 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 FAM27BQ5VT28 67 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 C9orf135Q5VTT2 229 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 UQCC3Q6UW78 93 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 SLC16A14Q7RTX9 510 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 FGFBP3Q8TAT2 258 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 BORCS8Q96FH0 119 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 SULT4A1Q9BR01 284 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 TM2D1Q9BX74 207 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 ZNF700Q9H0M5 742 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 CBR3O75828 277 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 ZNF708P17019 499 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 ALDH3B1P43353 468 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 PIGPP57054 158 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 WIPI1Q5MNZ9 446 aaPredicted RBP17.03■□□□□ 0.32
COL13A1-201ENST00000354547 AQP10Q96PS8 301 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 LPAR3Q9UBY5 353 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 MEMO1Q9Y316 297 aa17.03■□□□□ 0.32
COL13A1-201ENST00000354547 PET100P0DJ07 73 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 NAAAQ02083 359 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms