RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ECDO95905 644 aaPredicted RBP17.55■□□□□ 0.4
TRIM4-202ENST00000354241 GTF2F2P13984 249 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 CD40P25942 277 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 MBNL2Q5VZF2 373 aaKnown RBP17.55■□□□□ 0.4
TRIM4-202ENST00000354241 RTN4RL2Q86UN3 420 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 BATF2Q8N1L9 274 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 ZSCAN4Q8NAM6 433 aaPredicted RBP17.55■□□□□ 0.4
TRIM4-202ENST00000354241 AQP3Q92482 292 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 RAB3CQ96E17 227 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 RTL8AQ9BWD3 113 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 TM2D1Q9BX74 207 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 CENPXA8MT69 81 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 H7C417 338 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 THBDP07204 575 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 GSTT2BP0CG30 244 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 KITLGP21583 273 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 CPT2P23786 658 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 TMEM108Q6UXF1 575 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 OR8G5Q8NG78 346 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 SLAMF9Q96A28 289 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 SEH1LQ96EE3 360 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 TMEM100Q9NV29 134 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 IL36GQ9NZH8 169 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 MTFP1Q9UDX5 166 aa17.55■□□□□ 0.4
TRIM4-202ENST00000354241 ITPR1Q14643 2758 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 SULT1C2O00338 296 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 CYB5AP00167 134 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 LPLP06858 475 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 SFTPBP07988 381 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 GABRR1P24046 479 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 KIR2DL3P43628 341 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 AP3S2P59780 193 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 OR8G1Q15617 311 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 PLAC9Q5JTB6 97 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 HAGHLQ6PII5 290 aaPredicted RBP17.54■□□□□ 0.4
TRIM4-202ENST00000354241 VHLLQ6RSH7 139 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 FAM89BQ8N5H3 189 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 GPX8Q8TED1 209 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 Q96M66 194 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 FAIMQ9NVQ4 179 aa17.54■□□□□ 0.4
TRIM4-202ENST00000354241 NOP16Q9Y3C1 178 aaKnown RBP17.54■□□□□ 0.4
TRIM4-202ENST00000354241 FAM240BA0A1B0GVZ2 78 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 NKX2-6A6NCS4 301 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 ATXN7O15265 892 aaPredicted RBP17.53■□□□□ 0.4
TRIM4-202ENST00000354241 FCER2P06734 321 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 BLVRBP30043 206 aaPredicted RBP17.53■□□□□ 0.4
TRIM4-202ENST00000354241 TMEM50BP56557 158 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 SSX8Q7RTT4 187 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 GLCCI1Q86VQ1 547 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 ZNF573Q86YE8 665 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 OSR2Q8N2R0 312 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
TRIM4-202ENST00000354241 ARHGAP5-AS1Q96IT6 56 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 MMP28Q9H239 520 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 SCPEP1Q9HB40 452 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 PCDHB16Q9NRJ7 776 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 ACACBO00763 2458 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 ANKRD20A5PA0PJZ0 165 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 H0YL77 283 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 MT-ND4P03905 459 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 PPP3CBP16298 524 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 HIST1H1DP16402 221 aaKnown RBP17.53■□□□□ 0.4
TRIM4-202ENST00000354241 BCL3P20749 454 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 GLRXP35754 106 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 NPBWR2P48146 333 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 NKX6-1P78426 367 aaPredicted RBP17.53■□□□□ 0.4
TRIM4-202ENST00000354241 DYRK1AQ13627 763 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 PCGF3Q3KNV8 242 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 MKXQ8IYA7 352 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 CELF2-AS1Q8N7Q2 184 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 WFIKKN1Q96NZ8 548 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 DUSP13Q9UII6 198 aa17.53■□□□□ 0.4
TRIM4-202ENST00000354241 SYNGR1O43759 233 aa17.52■□□□□ 0.4
TRIM4-202ENST00000354241 MSMPQ1L6U9 139 aa17.52■□□□□ 0.4
TRIM4-202ENST00000354241 PIGYQ3MUY2 71 aa17.52■□□□□ 0.4
TRIM4-202ENST00000354241 SAXO1Q8IYX7 474 aa17.52■□□□□ 0.4
TRIM4-202ENST00000354241 OR10AD1Q8NGE0 317 aa17.52■□□□□ 0.4
TRIM4-202ENST00000354241 NUDCD2Q8WVJ2 157 aa17.52■□□□□ 0.4
TRIM4-202ENST00000354241 C7orf50Q9BRJ6 194 aaKnown RBP17.52■□□□□ 0.4
TRIM4-202ENST00000354241 NLKQ9UBE8 527 aa17.52■□□□□ 0.4
TRIM4-202ENST00000354241 FOXI3A8MTJ6 420 aaPredicted RBP17.51■□□□□ 0.39
TRIM4-202ENST00000354241 GSTP1P09211 210 aaKnown RBP17.51■□□□□ 0.39
TRIM4-202ENST00000354241 PTAFRP25105 342 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 TAF9Q16594 264 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 OLFML2AQ68BL7 652 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 TRAPPC6BQ86SZ2 158 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 FBXL14Q8N1E6 418 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 PRR7Q8TB68 274 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 PPP1R14BQ96C90 147 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 OR51I2Q9H344 312 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 HRASLSQ9HDD0 168 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 CADP27708 2225 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.51■□□□□ 0.39
TRIM4-202ENST00000354241 TRAPPC2LH3BP13 241 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 MELTFP08582 738 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 CSF1P09603 554 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 GNG2P59768 71 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 ACTBP60709 375 aa17.51■□□□□ 0.39
TRIM4-202ENST00000354241 RPS23P62266 143 aaKnown RBP17.51■□□□□ 0.39
TRIM4-202ENST00000354241 ACTG1P63261 375 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms