RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 A8MXK9 166 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 CLDND1Q9NY35 253 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 RARRES3Q9UL19 164 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 TMX2-CTNND1H3BSU7 103 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 WNT11O96014 354 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 CLN3Q13286 438 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 HES3Q5TGS1 186 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 WDFY1Q8IWB7 410 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 TIMM9Q9Y5J7 89 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 SEMG1P04279 462 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 OR13G1Q8NGZ3 307 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 CYB5D2Q8WUJ1 264 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 IGSF8Q969P0 613 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 MBD1Q9UIS9 605 aaPredicted RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 EPHA8P29322 1005 aaPredicted RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 YBX1P67809 324 aaKnown RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 MOB3AQ96BX8 217 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 IGSF21Q96ID5 467 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 ZMAT3Q9HA38 289 aaKnown RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 OR51H1Q8NH63 302 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 CD99L2Q8TCZ2 262 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 NEUROG1Q92886 237 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 BOCQ9BWV1 1114 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 HAPLN2Q9GZV7 340 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 NXF5Q9H1B4 397 aaKnown RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 H3BML4 177 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 ZFAND5O76080 213 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 ARG1P05089 322 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 SP1P08047 785 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 SOD3P08294 240 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 POU3F2P20265 443 aaPredicted RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 FAM219AQ8IW50 185 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 PIANPQ8IYJ0 282 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.36□□□□□ -0.59
COL6A3-203ENST00000353578 TCRBV16S1A1N1A0A5B0 115 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 CTNSO60931 367 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 FUT6P51993 359 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 CMTM8Q8IZV2 173 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 OR1L6Q8NGR2 347 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 C5AR2Q9P296 337 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 FTSJ1Q9UET6 329 aa11.36□□□□□ -0.59
COL6A3-203ENST00000353578 SCN7AQ01118 1682 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 LEFTY2O00292 366 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 VDAC1P21796 283 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 HMGA2P52926 109 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 ZBP1Q9H171 429 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 OR2W1Q9Y3N9 320 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 FITM1A5D6W6 292 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 M0QZQ0 153 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 GYPAP02724 150 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 MEF2BQ02080 365 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SP3Q02447 781 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 KCNE4Q8WWG9 221 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 GLIPR2Q9H4G4 154 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 MRPS2Q9Y399 296 aaKnown RBP11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SERTM1A2A2V5 107 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 CD79AP11912 226 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 ARR3P36575 388 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 CCR5P51681 352 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SH2D5Q6ZV89 423 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 A0A1B0GU03 582 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SOD2P04179 222 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SFTPCP11686 197 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 PEX11GQ96HA9 241 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 DERL3Q96Q80 235 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 GABRG3Q99928 467 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 KCND3Q9UK17 655 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 KLF9Q13886 244 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-203ENST00000353578 TMEM99Q8N816 258 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 PTPMT1Q8WUK0 201 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-203ENST00000353578 MS4A6EQ96DS6 147 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SHBQ15464 509 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 SCAMP4Q969E2 229 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 GUCD1Q96NT3 240 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 OR8B4Q96RC9 309 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 VENTXO95231 258 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 IGHA1P01876 353 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 ZNF764Q96H86 408 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-203ENST00000353578 C16orf70Q9BSU1 422 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 ERVH48-1M5A8F1 160 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 HOXD4P09016 255 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-203ENST00000353578 ADOQ96SZ5 270 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 LIPGQ9Y5X9 500 aa11.35□□□□□ -0.59
COL6A3-203ENST00000353578 IGHA2P01877 340 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 F13BP05160 661 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 TCTN3Q6NUS6 607 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 ZG16BQ96DA0 208 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 TMEM56Q96MV1 263 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 OR6C1Q96RD1 312 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 AP5S1Q9NUS5 200 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 ZNF236Q9UL36 1845 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 COX20Q5RI15 118 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 TAS1R1Q7RTX1 841 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms