RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PITPNC1Q9UKF7 332 aa6.74□□□□□ -1.33
BRCA1-201ENST00000352993 NPIPA1Q9UND3 350 aa6.74□□□□□ -1.33
BRCA1-201ENST00000352993 GOLT1BQ9Y3E0 138 aa6.74□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF705FA8MVS1 300 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 M0R143 59 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 UTS2O95399 124 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 EFEMP2O95967 443 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF705DP0CH99 300 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF705BP0CI00 300 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 GZMBP10144 247 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 FUT3P21217 361 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 GLIPR1P48060 266 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TMEM50BP56557 158 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 FBXW4P57775 412 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 VAMP2P63027 116 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 HLA-DRB3P79483 266 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 FZD2Q14332 565 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 KIR2DS3Q14952 304 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 CST6Q15828 149 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 THNSL2Q86YJ6 484 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 FAM185AQ8N0U4 392 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 SLC35G3Q8N808 338 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 STT3BQ8TCJ2 826 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 PATE1Q8WXA2 126 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 GINS3Q9BRX5 216 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 APOOQ9BUR5 198 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 PBOV1Q9GZY1 135 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TRAV36DV7A0A075B6V5 113 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 XKRY2A2RUG3 117 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 CLDN34H7C241 214 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 HSD17B6O14756 317 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 ONECUT2O95948 504 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 SRP19P09132 144 aaKnown RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 OR5AC1P0C628 307 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 EDN3P14138 238 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 MYOGP15173 224 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 ATP6V0CP27449 155 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 CD200P41217 278 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 H3F3AP84243 136 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TMEM176BQ3YBM2 270 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 OR5R1Q8NH85 324 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 OR14L1PQ8NHC6 308 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 GPR119Q8TDV5 335 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TM4SF19Q96DZ7 209 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TBL1XR1Q9BZK7 514 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 MAGT1Q9H0U3 335 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 FOXD3Q9UJU5 478 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 OSGIN2Q9Y236 505 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 MMACHCQ9Y4U1 282 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 ARHGEF17Q96PE2 2063 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 LAMA2P24043 3122 aaKnown RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 IGLV1-36A0A0B4J1U3 117 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 CST7O76096 145 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TTRP02766 147 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 HLA-DOBP13765 273 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 CEBPBP17676 345 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 OPRM1P35372 400 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 DRD3P35462 400 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 DEFB103AP81534 67 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TLE1Q04724 770 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 IL15RAQ13261 267 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 PPA1Q15181 289 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TAF9Q16594 264 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 DNM1P34Q6PK57 102 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 LRRC18Q8N456 261 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 OR13D1Q8NGV5 346 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TMEM37Q8WXS4 190 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF775Q96BV0 537 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-201ENST00000352993 SLAMF6Q96DU3 332 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 WFIKKN1Q96NZ8 548 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 EMC6Q9BV81 110 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 TXNIPQ9H3M7 391 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 PLEKHJ1Q9NW61 149 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 LAMP3Q9UQV4 416 aa6.73□□□□□ -1.33
BRCA1-201ENST00000352993 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 A6NNC1 897 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 TMEM14DPA8MWL7 114 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 OBSL1O75147 1896 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 CTSBP07858 339 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 IL12BP29460 328 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 PMS2P11Q13670 270 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 WDR25Q64LD2 544 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-201ENST00000352993 ARMC6Q6NXE6 501 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF66Q6ZN08 573 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 CMTM1Q8IZ96 169 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 CRIPAKQ8N1N5 446 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 SLC26A10Q8NG04 563 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 OR52M1Q8NGK5 317 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 DTD1Q8TEA8 209 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 RTN4IP1Q8WWV3 396 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF524Q96C55 264 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 NUDT22Q9BRQ3 303 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 HDHD3Q9BSH5 251 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-201ENST00000352993 HDAC8Q9BY41 377 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 DKKL1Q9UK85 242 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 PRSS38A1L453 326 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 OTOL1A6NHN0 477 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-201ENST00000352993 MKRN2OSH3BPM6 223 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 PHF1O43189 567 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms