RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 GLS2Q9UI32 602 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 RAB22AQ9UL26 194 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 TNFSF18Q9UNG2 199 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 LOC100509620A0A075B734 347 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 METTL21EPA6NDL7 271 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 ZNF503-AS2A6NEH8 195 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 RAB27BO00194 218 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 HLA-HP01893 362 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 CST2P09228 141 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 SLC25A4P12235 298 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 ZBTB25P24278 435 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 BDKRB2P30411 391 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 LRRC37A5PQ49AS3 106 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 RNASE10Q5GAN6 216 aaKnown RBP11.65□□□□□ -0.54
UBA3-201ENST00000349511 DMRTC1Q5HYR2 192 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 FAM74A1Q5RGS3 127 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 LIN54Q6MZP7 749 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 SLC25A42Q86VD7 318 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 PAQR4Q8N4S7 273 aaPredicted RBP11.65□□□□□ -0.54
UBA3-201ENST00000349511 GVQW1Q8N7I0 195 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 Q8NA96 180 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 OR8B12Q8NGG6 310 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 MRGPRFQ96AM1 343 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 GMPPAQ96IJ6 420 aaPredicted RBP11.65□□□□□ -0.54
UBA3-201ENST00000349511 LINC00470Q9BZP3 86 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 RASL12Q9NYN1 266 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 COMMD9Q9P000 198 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 PRELID1Q9Y255 219 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 ZNF175Q9Y473 711 aa11.65□□□□□ -0.54
UBA3-201ENST00000349511 CACNA1AO00555 2505 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 FCGR2AP12318 317 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 PRSS12P56730 875 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 ZNF273Q14593 569 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 ACSF3Q4G176 576 aaPredicted RBP11.65□□□□□ -0.55
UBA3-201ENST00000349511 SLC22A6Q4U2R8 563 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 PRR30Q53SZ7 412 aaPredicted RBP11.65□□□□□ -0.55
UBA3-201ENST00000349511 VWA1Q6PCB0 445 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 FAM180AQ6UWF9 173 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 ABHD12BQ7Z5M8 362 aaPredicted RBP11.65□□□□□ -0.55
UBA3-201ENST00000349511 LYG2Q86SG7 212 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 CHST4Q8NCG5 386 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 OR10K1Q8NGX5 313 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 FAM46BQ96A09 425 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 PRRT1Q99946 306 aa11.65□□□□□ -0.55
UBA3-201ENST00000349511 VRK1Q99986 396 aaPredicted RBP11.65□□□□□ -0.55
UBA3-201ENST00000349511 KANTRA0A1W2PQU2 76 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 M0R135 149 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 SYT7O43581 403 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 OR2F2O95006 317 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 FARS2O95363 451 aaKnown RBP11.64□□□□□ -0.55
UBA3-201ENST00000349511 CRYABP02511 175 aaKnown RBP11.64□□□□□ -0.55
UBA3-201ENST00000349511 CCL2P13500 99 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 HTR5AP47898 357 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 GRB2P62993 217 aaKnown RBP11.64□□□□□ -0.55
UBA3-201ENST00000349511 HIST1H3AP68431 136 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 UNC119Q13432 240 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 PPP1R1AQ13522 171 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 OR2F1Q13607 317 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 HIKESHIQ53FT3 197 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 BEX5Q5H9J7 111 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 HIST2H3PS2Q5TEC6 136 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 OR52W1Q6IF63 320 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 RAB12Q6IQ22 244 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 HIST2H3AQ71DI3 136 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 ZNF799Q96GE5 643 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 FAM71F1Q96KD3 344 aaPredicted RBP11.64□□□□□ -0.55
UBA3-201ENST00000349511 CST11Q9H112 138 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 PRR14LQ5THK1 2151 aa11.64□□□□□ -0.55
UBA3-201ENST00000349511 A0A1W2PR80 420 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 C9orf170A2RU37 121 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 RPL36A-HNRNPH2H7BZ11 118 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 BCL2L11O43521 198 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 SYNGR3O43761 229 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 IL18BPO95998 194 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 CD79AP11912 226 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 CCNOP22674 350 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 GNALP38405 381 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 LUMP51884 338 aaPredicted RBP11.63□□□□□ -0.55
UBA3-201ENST00000349511 CAPZA1P52907 286 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 ATP1B3P54709 279 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 HGFACQ04756 655 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 ZNF345Q14585 488 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 TSC22D1Q15714 1073 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 FBXW9Q5XUX1 488 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 RPUSD3Q6P087 351 aaKnown RBP11.63□□□□□ -0.55
UBA3-201ENST00000349511 RHOUQ7L0Q8 258 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 FAM214BQ7L5A3 538 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 PPP1R1CQ8WVI7 109 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 NUDCD2Q8WVJ2 157 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 ADAT3Q96EY9 351 aaPredicted RBP11.63□□□□□ -0.55
UBA3-201ENST00000349511 PGAM5Q96HS1 289 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 OR2H1Q9GZK4 316 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 WNT5BQ9H1J7 359 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 BARX1Q9HBU1 254 aaPredicted RBP11.63□□□□□ -0.55
UBA3-201ENST00000349511 GPR84Q9NQS5 396 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 TIMM10BQ9Y5J6 103 aa11.63□□□□□ -0.55
UBA3-201ENST00000349511 A0A1B0GW55 424 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms