RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LTBRP36941 435 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 ERVK-16P61578 105 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 ADIRFQ15847 76 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 SP6Q3SY56 376 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 OR10J5Q8NHC4 309 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 PLK3Q9H4B4 646 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 ARID1BQ8NFD5 2236 aaPredicted RBP13.07□□□□□ -0.32
NUP50-201ENST00000347635 A0A1W2PPV4 95 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 F10P00742 488 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 VSIG8P0DPA2 414 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 GGNBP1Q5YKI7 109 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 FAM185AQ8N0U4 392 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 OR2Y1Q8NGV0 311 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 SOCS1O15524 211 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 ANGPTL7O43827 346 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 MICBQ29980 383 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 OR8B12Q8NGG6 310 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 SDSLQ96GA7 329 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 ADAM10O14672 748 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 IL2RGP31785 369 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 TAS2R30P59541 319 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 C6orf201Q7Z4U5 140 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 OR51H1Q8NH63 302 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 AMELYQ99218 206 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 GNG13Q9P2W3 67 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 C17orf112F2Z3M2 114 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 H7C1Q1 480 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 BAXQ07812 192 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 CATR1Q13166 79 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.06□□□□□ -0.32
NUP50-201ENST00000347635 SCARF2Q96GP6 870 aaPredicted RBP13.06□□□□□ -0.32
NUP50-201ENST00000347635 PECRQ9BY49 303 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 WDR54Q9H977 334 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 SLCO1B1Q9Y6L6 691 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 SURF2Q15527 256 aaPredicted RBP13.06□□□□□ -0.32
NUP50-201ENST00000347635 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 RNF133Q8WVZ7 376 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 CTHRC1Q96CG8 243 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 MRPS24Q96EL2 167 aaKnown RBP13.06□□□□□ -0.32
NUP50-201ENST00000347635 PLEKHF2Q9H8W4 249 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 J3QRE1 110 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 HOXD4P09016 255 aaPredicted RBP13.06□□□□□ -0.32
NUP50-201ENST00000347635 DHODHQ02127 395 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 LINC01590Q5TEZ4 76 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 SLC26A10Q8NG04 563 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 RXFP4Q8TDU9 374 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 SPSB1Q96BD6 273 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 OR2M5A3KFT3 312 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 RFC3P40938 356 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
NUP50-201ENST00000347635 CKAP5Q14008 2032 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 IGHV5-10-1A0A0J9YXX1 117 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 A8MXE2 369 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 TNFSF11O14788 317 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 CYB5BO43169 146 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 MT-CO2P00403 227 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 IL2RAP01589 272 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 MT-ND4LP03901 98 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 FGF2P09038 288 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 TMEM33P57088 247 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 TMEM255AQ5JRV8 349 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 PSMB3P49720 205 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 MGAT2Q10469 447 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 RAB31Q13636 194 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 ZNF658BQ4V348 819 aaPredicted RBP13.05□□□□□ -0.32
NUP50-201ENST00000347635 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 IGLV3-19P01714 112 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 KCNJ3P48549 501 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 HNF4GQ14541 408 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
NUP50-201ENST00000347635 OR2I1PQ8NGU4 316 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 PLEKHA3Q9HB20 300 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 MYOTQ9UBF9 498 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 PILRBQ9UKJ0 227 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 NPTNQ9Y639 398 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 KNL1Q8NG31 2342 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 BTBD17A6NE02 478 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 HOXA1P49639 335 aaPredicted RBP13.05□□□□□ -0.32
NUP50-201ENST00000347635 INSM1Q01101 510 aaPredicted RBP13.05□□□□□ -0.32
NUP50-201ENST00000347635 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 HINT2Q9BX68 163 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 GAB2Q9UQC2 676 aa13.05□□□□□ -0.32
NUP50-201ENST00000347635 HS3ST1O14792 307 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 KLK10O43240 276 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 FABP1P07148 127 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 MMP16P51512 607 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 TESK1Q15569 626 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 SSX2Q16385 188 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 CST9LP1Q5W188 147 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 NAA60Q9H7X0 242 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 SH3BGRL2Q9UJC5 107 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 SCN3AQ9NY46 2000 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 FUT6P51993 359 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 ELLP55199 621 aaPredicted RBP13.04□□□□□ -0.32
NUP50-201ENST00000347635 OR1C1Q15619 314 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 TBC1D28Q2M2D7 210 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 MOGAT2Q3SYC2 334 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 SFTPA2Q8IWL1 248 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 OR10G3Q8NGC4 313 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 OR2V1Q8NHB1 315 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms