RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 GLIPR1L1Q6UWM5 242 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 SLC25A26Q70HW3 274 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 MOGAT3Q86VF5 341 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 ZNF573Q86YE8 665 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 OR51D1Q8NGF3 324 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 OR5H6Q8NGV6 325 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 DIRC2Q96SL1 478 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 NKIRAS2Q9NYR9 191 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 ING4Q9UNL4 249 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 FBN2P35556 2912 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 A0A1W2PP11 408 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 A6NLC8 198 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 F8VVB4 439 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 F8VWA3 439 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 J3QT63 122 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 TNFSF4P23510 183 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 SRP9P49458 86 aaKnown RBP16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 RIN1Q13671 783 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 FAM209AQ5JX71 171 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 AWAT2Q6E213 333 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 ASCL4Q6XD76 172 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 C20orf204Q6ZNR8 217 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 CELF2-AS1Q8N7Q2 184 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 OR10K1Q8NGX5 313 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 SLAMF9Q96A28 289 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 PKIBQ9C010 78 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 LIN7BQ9HAP6 207 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 GCM1Q9NP62 436 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 C1orf123Q9NWV4 160 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 DCAF16Q9NXF7 216 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 MTCH1Q9NZJ7 389 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 OR5V1Q9UGF6 321 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 CACNG2Q9Y698 323 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 AKAP6Q13023 2319 aa16.05■□□□□ 0.16
CHMP4A-201ENST00000347519 TPD52L2O43399 206 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 CALCBP10092 127 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 GATA4P43694 442 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 NPBWR2P48146 333 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 QRFPP83859 136 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 MZT1Q08AG7 82 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 C2orf76Q3KRA6 126 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 WDR82Q6UXN9 313 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 CROCCP3Q8IVE0 287 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 PNLDC1Q8NA58 520 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 LGALS14Q8TCE9 139 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 FAM3DQ96BQ1 224 aa16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 NXF2Q9GZY0 626 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-201ENST00000347519 OVOL3O00110 214 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 LDLRAD4O15165 306 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 NDUFS7O75251 213 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 LY6HO94772 140 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 SFTPBP07988 381 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 BCL3P20749 454 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 SSTR2P30874 369 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 SOX6P35712 828 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 IL24Q13007 206 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 TESK1Q15569 626 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 DGUOKQ16854 277 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 PCGF3Q3KNV8 242 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 METAP1DQ6UB28 335 aaPredicted RBP16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 PXT1Q8NFP0 134 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 OR51F2Q8NH61 342 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 DECR2Q9NUI1 292 aa16.03■□□□□ 0.16
CHMP4A-201ENST00000347519 TEX15Q9BXT5 2789 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 TMEM272A0A1B0GTI8 110 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 LYNX1G3V0Z9 82 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 LYNX1P0DP58 116 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 VSIG8P0DPA2 414 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 EGR1P18146 543 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 EFNB2P52799 333 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 UNC119Q13432 240 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 SLC22A6Q4U2R8 563 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 BIVMQ86UB2 503 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 ZSCAN4Q8NAM6 433 aaPredicted RBP16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 TMEM104Q8NE00 496 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 MCFD2Q8NI22 146 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 ZNF671Q8TAW3 534 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 TBC1D15Q8TC07 691 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 CPNE2Q96FN4 548 aaPredicted RBP16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 EGLN1Q9GZT9 426 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 SAP30LQ9HAJ7 183 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 ELL3Q9HB65 397 aaPredicted RBP16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 COMMD3Q9UBI1 195 aa16.02■□□□□ 0.16
CHMP4A-201ENST00000347519 CELSR2Q9HCU4 2923 aa16.02■□□□□ 0.15
CHMP4A-201ENST00000347519 TMEM14DPA8MWL7 114 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 H7C417 338 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 CTDSP2O14595 271 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 WNT9BO14905 357 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 AKR7A2O43488 359 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 CDC14BO60729 498 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 KDM4BO94953 1096 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 BPNT1O95861 308 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 PGA5P0DJD9 388 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 ARSBP15848 533 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 GMFBP60983 142 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 ZNF404Q494X3 552 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 MKXQ8IYA7 352 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 SAXO1Q8IYX7 474 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 YIPF5Q969M3 257 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 FAM46BQ96A09 425 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms