RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CNIH2Q6PI25 160 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 GDPD1Q8N9F7 314 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 LINC01356Q8N9X3 169 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 OR8G5Q8NG78 346 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 OR2AJ1Q8NGZ0 328 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 C17orf50Q8WW18 174 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF665Q9H7R5 613 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 ABRACLQ9P1F3 81 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 GPR160Q9UJ42 338 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 J3QW42 95 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 ZNF205O95201 554 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 IGHV2-70P01814 119 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 LCATP04180 440 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 MMP16P51512 607 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 MFGE8Q08431 387 aaPredicted RBP13.52□□□□□ -0.25
RAB5C-201ENST00000346213 MAB21L1Q13394 359 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 CHRFAM7AQ494W8 412 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 LRRC28Q86X40 367 aaPredicted RBP13.52□□□□□ -0.25
RAB5C-201ENST00000346213 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.52□□□□□ -0.25
RAB5C-201ENST00000346213 C1orf174Q8IYL3 243 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 ZNF283Q8N7M2 679 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 MEGF10Q96KG7 1140 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 SLITRK2Q9H156 845 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 KCNS2Q9ULS6 477 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 SLC22A13Q9Y226 551 aa13.52□□□□□ -0.25
RAB5C-201ENST00000346213 AK6Q9Y3D8 172 aaKnown RBP13.52□□□□□ -0.25
RAB5C-201ENST00000346213 C3orf80F5H4A9 247 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 SLC2A2P11168 524 aaPredicted RBP13.51□□□□□ -0.25
RAB5C-201ENST00000346213 ATF1P18846 271 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 ZMYND11Q15326 602 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 UNQ6126/PRO20091Q6UXV3 157 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 OR10AC1Q8NH08 325 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 GFI1Q99684 422 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 SP140LQ9H930 580 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 TCF7L1Q9HCS4 588 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 GCM1Q9NP62 436 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 G6PC2Q9NQR9 355 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 CYSLTR2Q9NS75 346 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 CENPMQ9NSP4 180 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 RHBDL2Q9NX52 303 aa13.51□□□□□ -0.25
RAB5C-201ENST00000346213 CGGBP1Q9UFW8 167 aaPredicted RBP13.51□□□□□ -0.25
RAB5C-201ENST00000346213 ISG15P05161 165 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 FAM157CP0CG43 387 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 ELK1P19419 428 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 ZFP36P26651 326 aaKnown RBP13.5□□□□□ -0.25
RAB5C-201ENST00000346213 SOX2P48431 317 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 DEFA1P59665 94 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 DEFA3P59666 94 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 HFEQ30201 348 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 RDH10Q8IZV5 341 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 OR8H2Q8N162 312 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 POC5Q8NA72 575 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 TRMT10AQ8TBZ6 339 aaKnown RBP13.5□□□□□ -0.25
RAB5C-201ENST00000346213 ORAI1Q96D31 301 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 NIPAL2Q9H841 368 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 CDC42EP3Q9UKI2 254 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 OR52A1Q9UKL2 312 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 V9GY05 133 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 COL6A5A8TX70 2615 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 FAM25AB3EWG3 89 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 FAM25CB3EWG5 89 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 FAM25GB3EWG6 89 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 ZNF878C9JN71 531 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 MAGEB3O15480 346 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 CYB5R3P00387 301 aaPredicted RBP13.5□□□□□ -0.25
RAB5C-201ENST00000346213 TUBG1P23258 451 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 ECH1Q13011 328 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 MPPED2Q15777 294 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 ODF4Q2M2E3 257 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 PRAMEF6Q5VXH4 476 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 LRRTM1Q86UE6 522 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 OR51A4Q8NGJ6 313 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 PPP1R14AQ96A00 147 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 TMEM106AQ96A25 262 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 CMTM3Q96MX0 182 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 KCNJ15Q99712 375 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 REPIN1Q9BWE0 567 aaKnown RBP13.5□□□□□ -0.25
RAB5C-201ENST00000346213 TUBG2Q9NRH3 451 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 C14orf119Q9NWQ9 140 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 HIF1ANQ9NWT6 349 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 GTF2A1LQ9UNN4 478 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 N6AMT1Q9Y5N5 214 aa13.5□□□□□ -0.25
RAB5C-201ENST00000346213 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 AIPO00170 330 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 PTTG1O95997 202 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 MSMBP08118 114 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 IL7P13232 177 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 SLC6A9P48067 706 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 DVL1P1P54792 670 aaPredicted RBP13.49□□□□□ -0.25
RAB5C-201ENST00000346213 TPTEP56180 551 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 BAK1Q16611 211 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 PYDC2Q56P42 97 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 TMEM244Q5VVB8 128 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 SAMD12Q8N8I0 201 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 C19orf18Q8NEA5 215 aa13.49□□□□□ -0.25
RAB5C-201ENST00000346213 TSEN15Q8WW01 171 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms