RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 IGSF23A1L1A6 192 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 LEUTXA8MZ59 168 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 GFYI3L273 518 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 TRAF4Q9BUZ4 470 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-201ENST00000345617 P2RY12Q9H244 342 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 TAAR3PQ9P1P4 343 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 HLA-DRB3P79483 266 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 INPP5JQ15735 1006 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-201ENST00000345617 CDKN3Q16667 212 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 WBP2Q969T9 261 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 ARRDC3Q96B67 414 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 OR52B4Q8NGK2 314 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 AP5S1Q9NUS5 200 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 A0A1B0GV72 72 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 FABP2P12104 132 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 VMA21Q3ZAQ7 101 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 IL24Q13007 206 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 RIGQ13278 110 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 SMAD2Q15796 467 aaKnown RBP17.44■□□□□ 0.38
HDAC4-201ENST00000345617 CASP8AP2Q9UKL3 1982 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 RSG1Q9BU20 258 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 AMMECR1LQ6DCA0 310 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 OTOSQ8NHW6 89 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 CDC42EP3Q9UKI2 254 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 SULT1A1P50225 295 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 PRSS54Q6PEW0 395 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 NAA60Q9H7X0 242 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 SLC6A12P48065 614 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 MAT1AQ00266 395 aaKnown RBP17.43■□□□□ 0.38
HDAC4-201ENST00000345617 TMEM230Q96A57 120 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 ZC3HAV1LQ96H79 300 aaKnown RBP17.43■□□□□ 0.38
HDAC4-201ENST00000345617 LINC00597Q9H2U6 94 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 COL16A1Q07092 1604 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-201ENST00000345617 C9orf170A2RU37 121 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 VASH2Q86V25 355 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 NKAIN4Q8IVV8 208 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 FAM24BQ8N5W8 94 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 RHBDD1Q8TEB9 315 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 DERL3Q96Q80 235 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 SDK2Q58EX2 2172 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 CXorf51AA0A1B0GTR3 108 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 TMEM40Q8WWA1 233 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 GRAMD2BQ96HH9 432 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 ISG20L2Q9H9L3 353 aaKnown RBP17.43■□□□□ 0.38
HDAC4-201ENST00000345617 SCGB1A1P11684 91 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 FRG2CA6NGY1 282 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 PPICP45877 212 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 CDC34P49427 236 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-201ENST00000345617 ERV3-1Q14264 604 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 PHOSPHO2Q8TCD6 241 aa17.43■□□□□ 0.38
HDAC4-201ENST00000345617 B2MP61769 119 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 DHRS13Q6UX07 377 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 DUSP18Q8NEJ0 188 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 PECRQ9BY49 303 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 ZNF346Q9UL40 294 aaKnown RBP17.42■□□□□ 0.38
HDAC4-201ENST00000345617 CTDSPLO15194 276 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 AWAT1Q58HT5 328 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 PIK3IP1Q96FE7 263 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 NEURL1O76050 574 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 CYBAP13498 195 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 EPHA2P29317 976 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 ZNF275Q9NSD4 429 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-201ENST00000345617 COX6CP09669 75 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 FAM26DQ5JW98 314 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 NCKAP5O14513 1909 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 SLC2A10O95528 541 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 LRRC10Q5BKY1 277 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 PABPC1L2AQ5JQF8 200 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 FGF13Q92913 245 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 SLC25A37Q9NYZ2 338 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 MFNGO00587 321 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 GSTZ1O43708 216 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-201ENST00000345617 YBX1P67809 324 aaKnown RBP17.42■□□□□ 0.38
HDAC4-201ENST00000345617 FUT7Q11130 342 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 TUSC1Q2TAM9 212 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 CD300LDQ6UXZ3 194 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 C10orf35Q96D05 121 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 HHIPQ96QV1 700 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 MRPS16Q9Y3D3 137 aaKnown RBP17.42■□□□□ 0.38
HDAC4-201ENST00000345617 NCOR1O75376 2440 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 SIRPB1O00241 398 aa17.42■□□□□ 0.38
HDAC4-201ENST00000345617 HTRA3P83110 453 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 KHDC3LQ587J8 217 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 XAF1Q6GPH4 301 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 PDPNQ86YL7 162 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 MUC20Q8N307 709 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-201ENST00000345617 WFIKKN1Q96NZ8 548 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 MS4A18H0YCH9 400 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 SRP14P37108 136 aaKnown RBP17.41■□□□□ 0.38
HDAC4-201ENST00000345617 CRYBB2P43320 205 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ST3GAL2Q16842 350 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 MS4A18Q3C1V0 323 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 FGF14Q92915 247 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 STARD4Q96DR4 205 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 OR2A5Q96R48 311 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ZFP30Q9Y2G7 519 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 C11orf94C9JXX5 98 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ZNF25P17030 456 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ZNF385BQ569K4 471 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 DEGS2Q6QHC5 323 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms