RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 WDR82Q6UXN9 313 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 ZNF826PQ6ZT77 177 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 NLRC3Q7RTR2 1065 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 BIVMQ86UB2 503 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 C11orf53Q8IXP5 236 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 OR13C9Q8NGT0 318 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 TRMT10AQ8TBZ6 339 aaKnown RBP9.95□□□□□ -0.82
SNCA-202ENST00000345009 NPRL2Q8WTW4 380 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 LRRC29Q8WV35 223 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 PHYHIPQ92561 330 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 RPL3LQ92901 407 aaKnown RBP9.95□□□□□ -0.82
SNCA-202ENST00000345009 PGLYRP3Q96LB9 341 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 TMED9Q9BVK6 235 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 PKIBQ9C010 78 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 NARFLQ9H6Q4 476 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 TMEM138Q9NPI0 162 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 RASL12Q9NYN1 266 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 DNAJB11Q9UBS4 358 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 MIOXQ9UGB7 285 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 MEGF11A6BM72 1044 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 OOEPA6NGQ2 149 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 LHBP01229 141 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 IGHV2-70P01814 119 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 ACAA1P09110 424 aaPredicted RBP9.94□□□□□ -0.82
SNCA-202ENST00000345009 TGFBR2P37173 567 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 IL24Q13007 206 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 ZMYND11Q15326 602 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 ACSM3Q53FZ2 586 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 DMRTC1Q5HYR2 192 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 UBE2UQ5VVX9 321 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 CYB5R2Q6BCY4 276 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 WDR86Q86TI4 376 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 Q8IYB0 196 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 PNLDC1Q8NA58 520 aaKnown RBP9.94□□□□□ -0.82
SNCA-202ENST00000345009 DEFB108BQ8NET1 73 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 TSPAN14Q8NG11 270 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 CLDND2Q8NHS1 167 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 AQP3Q92482 292 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 RGP1Q92546 391 aaPredicted RBP9.94□□□□□ -0.82
SNCA-202ENST00000345009 TMIGD2Q96BF3 282 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 C12orf43Q96C57 262 aaKnown RBP9.94□□□□□ -0.82
SNCA-202ENST00000345009 OR14A2Q96R54 314 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 NR1H4Q96RI1 486 aaPredicted RBP9.94□□□□□ -0.82
SNCA-202ENST00000345009 GPER1Q99527 375 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 SLITRK2Q9H156 845 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 TMEM165Q9HC07 324 aa9.94□□□□□ -0.82
SNCA-202ENST00000345009 IGKV1-9A0A0C4DH69 117 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 SRRM5B3KS81 715 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 B4DSR2 109 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 TRAPPC2LH3BP13 241 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 AKR7A2O43488 359 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 NOS1APO75052 506 aaPredicted RBP9.93□□□□□ -0.82
SNCA-202ENST00000345009 GPX5O75715 221 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 ARL6IP5O75915 188 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 ALDOBP05062 364 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 GLRA1P23415 457 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 MPZP25189 248 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 PSMB9P28065 219 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 BDKRB2P30411 391 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 GABRA5P31644 462 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 RANBP1P43487 201 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 RPS11P62280 158 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNCA-202ENST00000345009 DOC2BQ14184 412 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 KISS1Q15726 138 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 TMEM249Q2WGJ8 235 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 SMIM21Q3B7S5 101 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 ZNF404Q494X3 552 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 SFRP4Q6FHJ7 346 aaPredicted RBP9.93□□□□□ -0.82
SNCA-202ENST00000345009 FIP1L1Q6UN15 594 aaKnown RBP9.93□□□□□ -0.82
SNCA-202ENST00000345009 DCDC5Q6ZRR9 648 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 CEACAM19Q7Z692 300 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 SATL1Q86VE3 508 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 ANGPTL5Q86XS5 388 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 FAM90A1Q86YD7 464 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 PHC2Q8IXK0 858 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 CIARTQ8N365 385 aaPredicted RBP9.93□□□□□ -0.82
SNCA-202ENST00000345009 GCSAMQ8N6F7 178 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 EDARADDQ8WWZ3 215 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 TMEM203Q969S6 136 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 S100A13Q99584 98 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 ZNF665Q9H7R5 613 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 RHOFQ9HBH0 211 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 TCF7L1Q9HCS4 588 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 PCDHB16Q9NRJ7 776 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 DCAF16Q9NXF7 216 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 TAS2R4Q9NYW5 299 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 FOXJ3Q9UPW0 622 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 HIVEP2P31629 2446 aa9.93□□□□□ -0.82
SNCA-202ENST00000345009 TRBV5-7A0A0A0MS05 114 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 CCRL2O00421 344 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 RGS9O75916 674 aaPredicted RBP9.92□□□□□ -0.82
SNCA-202ENST00000345009 NXPH2O95156 264 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 ZNF205O95201 554 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 PGA5P0DJD9 388 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 TMEM225BP0DP42 221 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 RPS2P15880 293 aaKnown RBP9.92□□□□□ -0.82
SNCA-202ENST00000345009 FSTP19883 344 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 PCMT1P22061 227 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 POU3F4P49335 361 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms