RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 GAFA1Q96PS6 74 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 TBX15Q96SF7 602 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 SIRPDQ9H106 197 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 LOC107986453A0A1B0GWG9 222 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 PQLC2LA1A4F0 135 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 A6NIN4 97 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 SLC16A6O15403 523 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 FCN3O75636 299 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 SERPINA3P01011 423 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 ACAA1P09110 424 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-201ENST00000344376 NDUFB7P17568 137 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 AMY2BP19961 511 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 ISL1P61371 349 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 ACTA2P62736 377 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 ACTG2P63267 376 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 FGFRL1Q8N441 504 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 ACBD7Q8N6N7 88 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 KIR3DL3Q8N743 410 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 LY6G5BQ8NDX9 201 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 C10orf35Q96D05 121 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 SLC29A1Q99808 456 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 DCTN5Q9BTE1 182 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 DOCK11Q5JSL3 2073 aa13.28□□□□□ -0.28
ATG4B-201ENST00000344376 ANK2Q01484 3957 aa13.27□□□□□ -0.28
ATG4B-201ENST00000344376 LOC100130705A0A1B0GUX0 176 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 TMEM89A2RUT3 159 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 H3BSH0 61 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 CLDN34H7C241 214 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 PGA5P0DJD9 388 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 PSG2P11465 335 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 CAV3P56539 151 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 ZNF91Q05481 1191 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 DGUOKQ16854 277 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 TMEM244Q5VVB8 128 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 ENTHD1Q8IYW4 607 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 PRSS35Q8N3Z0 413 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 ZNF555Q8NEP9 628 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 TMEM185AQ8NFB2 350 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 LHX4Q969G2 390 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 DUX5Q96PT3 197 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 CHST5Q9GZS9 411 aa13.27□□□□□ -0.29
ATG4B-201ENST00000344376 IGKV1D-17A0A075B6S4 117 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 CENPVL3A0A0U1RRI6 287 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 FAM230AA0A1W2PPH8 454 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 J3QRE1 110 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 SYNGR1O43759 233 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 NXPH2O95156 264 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 FADS2O95864 444 aaKnown RBP13.26□□□□□ -0.29
ATG4B-201ENST00000344376 RNASE1P07998 156 aaKnown RBP13.26□□□□□ -0.29
ATG4B-201ENST00000344376 HTR1AP08908 422 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 SELLP14151 372 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 COMPP49747 757 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-201ENST00000344376 CAPZA1P52907 286 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 CNN3Q15417 329 aaKnown RBP13.26□□□□□ -0.29
ATG4B-201ENST00000344376 OGFRL1Q5TC84 451 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-201ENST00000344376 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 VMO1Q7Z5L0 202 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 OR2G2Q8NGZ5 317 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 RHOXF1Q8NHV9 184 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 C8orf46Q8TAG6 207 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 TRMT10AQ8TBZ6 339 aaKnown RBP13.26□□□□□ -0.29
ATG4B-201ENST00000344376 PP6455Q8WZ26 134 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 LGALS12Q96DT0 336 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 RDH12Q96NR8 316 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 PKIBQ9C010 78 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 NOX4Q9NPH5 578 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
ATG4B-201ENST00000344376 EXOGQ9Y2C4 368 aaKnown RBP13.26□□□□□ -0.29
ATG4B-201ENST00000344376 IGHV1-69DA0A0B4J2H0 117 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 A0A1W2PQ09 198 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 SLC1A7O00341 560 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 NOS1APO75052 506 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-201ENST00000344376 IGHV1-69P01742 117 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 TFF1P04155 84 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 DBTP11182 482 aaKnown RBP13.25□□□□□ -0.29
ATG4B-201ENST00000344376 GABRB1P18505 474 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 MPZP25189 248 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 KIR3DL2P43630 455 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 FUT6P51993 359 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 OR12D2P58182 307 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 DEFB112Q30KQ8 113 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 RUSC1-AS1Q66K80 236 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 NPRL2Q8WTW4 380 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 SDSLQ96GA7 329 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 ZNF488Q96MN9 340 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 FAM118AQ9NWS6 357 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 SMPD3Q9NY59 655 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-201ENST00000344376 AASSQ9UDR5 926 aa13.25□□□□□ -0.29
ATG4B-201ENST00000344376 SOX21Q9Y651 276 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-201ENST00000344376 TRBV23-1A0A0A0MS06 115 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 MDFIC2A0A1B0GVS7 189 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 J3QLW9 94 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 ZNF19P17023 458 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 ZNF20P17024 532 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 CCR9P51686 369 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 RAB40BQ12829 278 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 IL24Q13007 206 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 BLMHQ13867 455 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 SLC9A3R2Q15599 337 aa13.24□□□□□ -0.29
ATG4B-201ENST00000344376 FDX2Q6P4F2 183 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms