RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SAP30LQ9HAJ7 183 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 C12orf10Q9HB07 376 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 FOSL1P15407 271 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 NTF3P20783 257 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 LIMS2Q7Z4I7 341 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF485Q8NCK3 441 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 HGDQ93099 445 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 SMIM7Q9BQ49 75 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 KLK11Q9UBX7 282 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 MYH14Q7Z406 1995 aaKnown RBP13.35□□□□□ -0.27
UBE3B-202ENST00000342494 A0A0A6YYJ9 748 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 A0A1W2PN81 502 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 TMPRSS2O15393 492 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 OR2J3O76001 311 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 AVPR2P30518 371 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 CHRNA7P36544 502 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 KIR2DL1P43626 348 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-202ENST00000342494 ASB5Q8WWX0 329 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 FGF2P09038 288 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 TGFBR1P36897 503 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 LIMK1P53667 647 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 TMEM128Q5BJH2 165 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 DCAF10Q5QP82 559 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 C12orf73Q69YU5 71 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF705AQ6ZN79 300 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-202ENST00000342494 TIPARPQ7Z3E1 657 aaKnown RBP13.34□□□□□ -0.27
UBE3B-202ENST00000342494 MRGPRDQ8TDS7 321 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 BCL2L2Q92843 193 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-202ENST00000342494 C14orf79Q96F83 325 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 OR51I2Q9H344 312 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 MPC1Q9Y5U8 109 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 MASP2O00187 686 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF17P17021 662 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF425Q6IV72 752 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 MRGPREQ86SM8 312 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 ARHGAP5-AS1Q96IT6 56 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
UBE3B-202ENST00000342494 SNRPGP15A8MWD9 76 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 GAB4Q2WGN9 574 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 OR5AP2Q8NGF4 316 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 OR13D1Q8NGV5 346 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 OR6X1Q8NH79 312 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 TMEM171Q8WVE6 324 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 FGF11Q92914 225 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 ZG16BQ96DA0 208 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 A0A1B0GUH1 482 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 CST7O76096 145 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 OR2C1O95371 312 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 EML2O95834 649 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 LPAR6P43657 344 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 RHOBP62745 196 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 ADAM5Q6NVV9 412 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 EID2BQ96D98 161 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 TJP1Q07157 1748 aa13.34□□□□□ -0.27
UBE3B-202ENST00000342494 AKR7A2O43488 359 aa13.33□□□□□ -0.27
UBE3B-202ENST00000342494 SNCGO76070 127 aa13.33□□□□□ -0.27
UBE3B-202ENST00000342494 DUS4LO95620 317 aaKnown RBP13.33□□□□□ -0.27
UBE3B-202ENST00000342494 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.27
UBE3B-202ENST00000342494 SFTPA2Q8IWL1 248 aa13.33□□□□□ -0.27
UBE3B-202ENST00000342494 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.27
UBE3B-202ENST00000342494 NEIL1Q96FI4 390 aaPredicted RBP13.33□□□□□ -0.27
UBE3B-202ENST00000342494 HSD17B10Q99714 261 aaKnown RBP13.33□□□□□ -0.27
UBE3B-202ENST00000342494 SF3B5Q9BWJ5 86 aaKnown RBP13.33□□□□□ -0.27
UBE3B-202ENST00000342494 ARPC4-TTLL3A0A0A6YYG9 625 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 DCTN6O00399 190 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 C1QBP02746 253 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 TRAPPC2P0DI81 140 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 TRAPPC2BP0DI82 140 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 ID4P47928 161 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 WNT3P56703 355 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 ZIC1Q15915 447 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 DYNC2LI1Q8TCX1 351 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 FAAP24Q9BTP7 215 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 MBD1Q9UIS9 605 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-202ENST00000342494 PRR35P0CG20 571 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 KIR2DS2P43631 304 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 MLF1P58340 268 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 OR2B8PP59922 312 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 FOXO1Q12778 655 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 SLC25A30Q5SVS4 291 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 OR2D2Q9H210 308 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 SLC25A32Q9H2D1 315 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 GAR1Q9NY12 217 aaKnown RBP13.33□□□□□ -0.28
UBE3B-202ENST00000342494 KIAA0141Q14154 515 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-202ENST00000342494 SP6Q3SY56 376 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 DGAT2L6Q6ZPD8 337 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF441Q8N8Z8 693 aa13.33□□□□□ -0.28
UBE3B-202ENST00000342494 S100A8P05109 93 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 SMIM18P0DKX4 95 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 CD37P11049 281 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 HIST1H1DP16402 221 aaKnown RBP13.32□□□□□ -0.28
UBE3B-202ENST00000342494 OR3A1P47881 315 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 WDR31Q8NA23 367 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 GSX2Q9BZM3 304 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF230Q9UIE0 474 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-202ENST00000342494 IGHV3-13P01766 116 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 IGHV3-7P01780 117 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms