RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 HPSE2Q8WWQ2 592 aa14.85□□□□□ -0.03
CLDN4-201ENST00000340958 PCNX1Q96RV3 2341 aa14.85□□□□□ -0.03
CLDN4-201ENST00000340958 ADAT1Q9BUB4 502 aaKnown RBP14.85□□□□□ -0.03
CLDN4-201ENST00000340958 SELENOIQ9C0D9 397 aa14.85□□□□□ -0.03
CLDN4-201ENST00000340958 PCDHB16Q9NRJ7 776 aa14.85□□□□□ -0.03
CLDN4-201ENST00000340958 FBLN5Q9UBX5 448 aa14.85□□□□□ -0.03
CLDN4-201ENST00000340958 PAIP2BQ9ULR5 123 aaKnown RBP14.85□□□□□ -0.03
CLDN4-201ENST00000340958 NOP16Q9Y3C1 178 aaKnown RBP14.85□□□□□ -0.03
CLDN4-201ENST00000340958 A0A1W2PP11 408 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 OR5B21A6NL26 309 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 MGMTP16455 207 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 ALDH3B1P43353 468 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 PTH2RP49190 550 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 SELENOVP59797 346 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 GNG3P63215 75 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 DGCR2P98153 550 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 ALKBH6Q3KRA9 238 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 MBNL2Q5VZF2 373 aaKnown RBP14.84□□□□□ -0.03
CLDN4-201ENST00000340958 SLC25A26Q70HW3 274 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 KRT74Q7RTS7 529 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 ZNF611Q8N823 705 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 POU2F3Q9UKI9 436 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 USP9YO00507 2555 aaPredicted RBP14.84□□□□□ -0.03
CLDN4-201ENST00000340958 DOPEY1Q5JWR5 2465 aa14.84□□□□□ -0.03
CLDN4-201ENST00000340958 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.83□□□□□ -0.04
CLDN4-201ENST00000340958 ABCD4O14678 606 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 CTDSPLO15194 276 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 TPPPO94811 219 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 HLA-DQB1P01920 261 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 CD3GP09693 182 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 GTF2F2P13984 249 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 GLRXP35754 106 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 MRPS10P82664 201 aaKnown RBP14.83□□□□□ -0.04
CLDN4-201ENST00000340958 SNTB1Q13884 538 aaKnown RBP14.83□□□□□ -0.04
CLDN4-201ENST00000340958 CRIP3Q6Q6R5 217 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 BIVMQ86UB2 503 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 ZNF573Q86YE8 665 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 OR8G5Q8NG78 346 aa14.83□□□□□ -0.04
CLDN4-201ENST00000340958 GCDHQ92947 438 aaPredicted RBP14.83□□□□□ -0.04
CLDN4-201ENST00000340958 SPTBN1Q01082 2364 aaKnown RBP14.83□□□□□ -0.04
CLDN4-201ENST00000340958 GABARAPH6UMI1 98 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 THBDP07204 575 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 CHRM2P08172 466 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 PTHLHP12272 177 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 BSPH1Q075Z2 132 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 CDH24Q86UP0 819 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 CALHM1Q8IU99 346 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 CADM3Q8N126 398 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 TOMM5Q8N4H5 51 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 OR56B1Q8NGI3 324 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 SETD6Q8TBK2 473 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 SMIM4Q8WVI0 70 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 C1orf147Q96MC9 270 aaPredicted RBP14.82□□□□□ -0.04
CLDN4-201ENST00000340958 NICN1Q9BSH3 213 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 SLC22A4Q9H015 551 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 ZMAT3Q9HA38 289 aaKnown RBP14.82□□□□□ -0.04
CLDN4-201ENST00000340958 KITLGP21583 273 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 PRSS3P35030 304 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 MOGAT2Q3SYC2 334 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 FBXL19-AS1Q494R0 122 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 HAGHLQ6PII5 290 aaPredicted RBP14.82□□□□□ -0.04
CLDN4-201ENST00000340958 MKXQ8IYA7 352 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 PXT1Q8NFP0 134 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 OR10R2Q8NGX6 335 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 SYT3Q9BQG1 590 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 LPAR5Q9H1C0 372 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 ESRP2Q9H6T0 727 aaKnown RBP14.82□□□□□ -0.04
CLDN4-201ENST00000340958 AUNIPQ9H7T9 357 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 ATP23Q9Y6H3 246 aa14.82□□□□□ -0.04
CLDN4-201ENST00000340958 ASH1LQ9NR48 2969 aaKnown RBP14.81□□□□□ -0.04
CLDN4-201ENST00000340958 GSTZ1O43708 216 aaPredicted RBP14.81□□□□□ -0.04
CLDN4-201ENST00000340958 CPT2P23786 658 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 KLF3P57682 345 aaPredicted RBP14.81□□□□□ -0.04
CLDN4-201ENST00000340958 RPS27AP62979 156 aaKnown RBP14.81□□□□□ -0.04
CLDN4-201ENST00000340958 SEZ6L2Q6UXD5 910 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 BATF2Q8N1L9 274 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 ZSCAN4Q8NAM6 433 aaPredicted RBP14.81□□□□□ -0.04
CLDN4-201ENST00000340958 OR52I2Q8NH67 350 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 LINC01560Q8TB33 94 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 SLAMF9Q96A28 289 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 HECTD1Q9ULT8 2610 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 ICE1Q9Y2F5 2266 aa14.81□□□□□ -0.04
CLDN4-201ENST00000340958 PLSCR5A0PG75 271 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 DPRXA6NFQ7 191 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 TRAPPC2LH3BP13 241 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 LANCL1O43813 399 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 GABRR1P24046 479 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 CDNFQ49AH0 187 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 HACD4Q5VWC8 232 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 MZT2BQ6NZ67 158 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 OR10AD1Q8NGE0 317 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 OR13G1Q8NGZ3 307 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 YIPF5Q969M3 257 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 RAB3CQ96E17 227 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 FGF23Q9GZV9 251 aaPredicted RBP14.8□□□□□ -0.04
CLDN4-201ENST00000340958 MSL2Q9HCI7 577 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 TBC1D24Q9ULP9 559 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 HEATR1Q9H583 2144 aaKnown RBP14.8□□□□□ -0.04
CLDN4-201ENST00000340958 PRR14LQ5THK1 2151 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 CENPXA8MT69 81 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms