RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ASB10Q8WXI3 467 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 SLC39A7Q92504 469 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 PECRQ9BY49 303 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
RRP1B-201ENST00000340648 RNF150Q9ULK6 438 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 POMT1Q9Y6A1 747 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 SIRPB1O00241 398 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 LAMTOR5O43504 91 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 ADAM20O43506 726 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 ACTL6BO94805 426 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 RPS4XP62701 263 aaKnown RBP13.17□□□□□ -0.3
RRP1B-201ENST00000340648 DHODHQ02127 395 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 FOXQ1Q9C009 403 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
RRP1B-201ENST00000340648 TMED3Q9Y3Q3 217 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 TRBV5-5A0A0J9YX44 114 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 C5orf49A4QMS7 147 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 TNFSF14O43557 240 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 TMEM255AQ5JRV8 349 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 FAM109BQ6ICB4 259 aaPredicted RBP13.17□□□□□ -0.3
RRP1B-201ENST00000340648 RABEPKQ7Z6M1 372 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 EXTL1Q92935 676 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 A0A0G2JK05 382 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 IRF2P14316 349 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 MUC1P15941 1255 aaPredicted RBP13.17□□□□□ -0.3
RRP1B-201ENST00000340648 RAB5AP20339 215 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 GPR3P46089 330 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 RRADP55042 308 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 LINC00518Q8N0U6 118 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 MRPL24Q96A35 216 aaKnown RBP13.17□□□□□ -0.3
RRP1B-201ENST00000340648 NRIP2Q9BQI9 281 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 SPAG17Q6Q759 2223 aa13.17□□□□□ -0.3
RRP1B-201ENST00000340648 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 JMJD6Q6NYC1 403 aaPredicted RBP13.16□□□□□ -0.3
RRP1B-201ENST00000340648 H2BFWTQ7Z2G1 175 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 SFTPA2Q8IWL1 248 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 OR10G3Q8NGC4 313 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 C12orf49Q9H741 205 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 PISDQ9UG56 409 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 OR5H15A6NDH6 313 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 UPK3AO75631 287 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 FGF2P09038 288 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 METTL15P1P0C7V9 234 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 ICAM2P13598 275 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 CALCRP30988 508 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 SULT1A1P50225 295 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
RRP1B-201ENST00000340648 Q6ZS52 159 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 OR1L3Q8NH93 324 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 ADAT3Q96EY9 351 aaPredicted RBP13.16□□□□□ -0.3
RRP1B-201ENST00000340648 TMEM229AB2RXF0 380 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 BGLAPP02818 100 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 FUT3P21217 361 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 NOVA1P51513 510 aaKnown RBP13.16□□□□□ -0.3
RRP1B-201ENST00000340648 EXT1Q16394 746 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 TMEM18Q96B42 140 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 SPSB1Q96BD6 273 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 NTNG2Q96CW9 530 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 HIPK2Q9H2X6 1198 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 CDRT15L2A8MXV6 281 aa13.16□□□□□ -0.3
RRP1B-201ENST00000340648 VSTM5A8MXK1 200 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 FUT7Q11130 342 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 MYOTQ9UBF9 498 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 MFNGO00587 321 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 OR2A4O95047 310 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 FUT6P51993 359 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 EDDM3AQ14507 147 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 LDLRAD3Q86YD5 345 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 C17orf78Q8N4C9 275 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 OR2A7Q96R45 310 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 LIPGQ9Y5X9 500 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 NYNRINQ9P2P1 1898 aaKnown RBP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 A0A0G2JMZ2 1700 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 LRRC37A2A6NM11 1700 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 SPINT1O43278 529 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 OR8U8P0C7N1 319 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 ENDOGQ14249 297 aaKnown RBP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 UNQ9370/PRO34162Q6UXP9 181 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 ROBO4Q8WZ75 1007 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 SPACA9Q96E40 222 aaPredicted RBP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 TXN2Q99757 166 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 LANCL2Q9NS86 450 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 OR5AC2Q9NZP5 309 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 HOXC4P09017 264 aaPredicted RBP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 RAB4AP20338 218 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 BTCP35070 178 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 LINC00696Q6ZRV3 163 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 FAM210BQ96KR6 192 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 ACTR3CQ9C0K3 210 aaPredicted RBP13.15□□□□□ -0.3
RRP1B-201ENST00000340648 TLNRD1Q9H1K6 362 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 RPH3ALQ9UNE2 315 aa13.15□□□□□ -0.3
RRP1B-201ENST00000340648 C3orf85A0A1B0GTC6 90 aa13.14□□□□□ -0.31
RRP1B-201ENST00000340648 UBE2L5PA0A1B0GUS4 154 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms