RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PCMT1P22061 227 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 WNT4P56705 351 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 SLC35A2P78381 396 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 DOC2BQ14184 412 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 DCAF12L2Q5VW00 463 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 ZNF841Q6ZN19 808 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 NANOGP1Q8N7R0 232 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 OR4M2Q8NGB6 313 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 MYDGFQ969H8 173 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 SMIM19Q96E16 107 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 BORCS8Q96FH0 119 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 ZNF488Q96MN9 340 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 MMP26Q9NRE1 261 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 DNAJB11Q9UBS4 358 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 LPAR3Q9UBY5 353 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 CLN8Q9UBY8 286 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 DHDHQ9UQ10 334 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 POLR3KQ9Y2Y1 108 aaPredicted RBP12.71□□□□□ -0.38
UBE3B-201ENST00000340074 TPRKBQ9Y3C4 175 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 TMPRSS2O15393 492 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 ATF1P18846 271 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 HNF1AP20823 631 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
UBE3B-201ENST00000340074 WDR25Q64LD2 544 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-201ENST00000340074 STUMQ69YW2 141 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 DMKNQ6E0U4 476 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-201ENST00000340074 SERPINA12Q8IW75 414 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 TMIGD2Q96BF3 282 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 C12orf43Q96C57 262 aaKnown RBP12.7□□□□□ -0.38
UBE3B-201ENST00000340074 POM121Q96HA1 1249 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 CCL13Q99616 98 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 ZNF184Q99676 751 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-201ENST00000340074 RASSF4Q9H2L5 321 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 OR5V1Q9UGF6 321 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 ERGIC3Q9Y282 383 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 POLDIP2Q9Y2S7 368 aa12.7□□□□□ -0.38
UBE3B-201ENST00000340074 PPIAL4CA0A0B4J2A2 164 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 PNMA8CA0A1B0GUJ8 204 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 A0A1B0GW55 424 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 FCN3O75636 299 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 PLATP00750 562 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 AVPP01185 164 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 TFF1P04155 84 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4L2P0CJ85 424 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4L3P0CJ86 424 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4L4P0CJ87 422 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4L5P0CJ88 424 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4L6P0CJ89 424 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4L7P0CJ90 424 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 PGA5P0DJD9 388 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 AMY2BP19961 511 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 CRHBPP24387 322 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 MPZP25189 248 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 SOX2P48431 317 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 RBP2P50120 134 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 NPY4RP50391 375 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 RNLSQ5VYX0 342 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4L9Q6RFH8 374 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-201ENST00000340074 BATF2Q8N1L9 274 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 PARP16Q8N5Y8 322 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 POC1AQ8NBT0 407 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DNAAF1Q8NEP3 725 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 OR13C9Q8NGT0 318 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 GPR148Q8TDV2 347 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 GHSRQ92847 366 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 MND1Q9BWT6 205 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 CDCA4Q9BXL8 241 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 PKIBQ9C010 78 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUSP21Q9H596 190 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 ZCCHC4Q9H5U6 513 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 SMURF1Q9HCE7 757 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 NLKQ9UBE8 527 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 KAAG1Q9UBP8 84 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 DUX4Q9UBX2 424 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 ZNF281Q9Y2X9 895 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
UBE3B-201ENST00000340074 OR2AT4A6NND4 320 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 DVL1O14640 695 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 NOS1APO75052 506 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-201ENST00000340074 OCM2P0CE71 109 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 OCMP0CE72 109 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-201ENST00000340074 PRKACBP22694 351 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 GATA3P23771 443 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 ATP1B3P54709 279 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 TAS2R43P59537 309 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 PAX2Q02962 417 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 IL24Q13007 206 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 ACP7Q6ZNF0 438 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 C1orf229Q6ZS94 237 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-201ENST00000340074 LHFPL2Q6ZUX7 228 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 SLC36A1Q7Z2H8 476 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 OR5D14Q8NGL3 314 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 OR13C5Q8NGS8 318 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 ANGPTL6Q8NI99 470 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 SPSB1Q96BD6 273 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 PGLYRP3Q96LB9 341 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 OPALINQ96PE5 141 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 SPACA5Q96QH8 159 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 C7orf69Q9H7B7 122 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms