RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 EGR3Q06889 387 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 TTC9BQ8N6N2 239 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 OR4C13Q8NGP0 309 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 ANAPC16Q96DE5 110 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 ZPBPQ9BS86 351 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 COL8A1P27658 744 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 OLIG3Q7RTU3 272 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 SLCO4A1Q96BD0 722 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 SLC25A33Q9BSK2 321 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 NDRG4Q9ULP0 352 aaKnown RBP11.58□□□□□ -0.56
USP47-202ENST00000339865 MCM3APO60318 1980 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
USP47-202ENST00000339865 IGHV3-15A0A0B4J1V0 119 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 DNAL4O96015 105 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 PLAUP00749 431 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 GUCA2AQ02747 115 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 NPY5RQ15761 445 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 PAQR6Q6TCH4 344 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 DERL3Q96Q80 235 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 ZNF426Q9BUY5 554 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 TMEM129A0AVI4 362 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 NRG2O14511 850 aaPredicted RBP11.58□□□□□ -0.56
USP47-202ENST00000339865 ACTL6AO96019 429 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 PRLHRP49683 370 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 FAHD2BQ6P2I3 314 aaPredicted RBP11.58□□□□□ -0.56
USP47-202ENST00000339865 OSR2Q8N2R0 312 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 POMT2Q9UKY4 750 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 PIK3C2BO00750 1634 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 FAHP16930 419 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 BVESQ8NE79 360 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 ZFP30Q9Y2G7 519 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 APCSP02743 223 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 PRSS2P07478 247 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 RIGQ13278 110 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 OTPQ5XKR4 325 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 GABARAPL3Q9BY60 117 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 ZNF576Q9H609 170 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 MRPS2Q9Y399 296 aaKnown RBP11.58□□□□□ -0.56
USP47-202ENST00000339865 MAP1LC3B2A6NCE7 125 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 M0R082 166 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 HINT1P49773 126 aaPredicted RBP11.58□□□□□ -0.56
USP47-202ENST00000339865 MMP15P51511 669 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 LYZP61626 148 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 ADPRHL1Q8NDY3 354 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 OR10G8Q8NGN5 311 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 MAP1LC3BQ9GZQ8 125 aa11.58□□□□□ -0.56
USP47-202ENST00000339865 P01737 135 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 JUNBP17275 347 aaPredicted RBP11.57□□□□□ -0.56
USP47-202ENST00000339865 ARR3P36575 388 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 CTSCP53634 463 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 GP2P55259 537 aaKnown RBP11.57□□□□□ -0.56
USP47-202ENST00000339865 ZNF121P58317 390 aaPredicted RBP11.57□□□□□ -0.56
USP47-202ENST00000339865 RELQ04864 619 aaPredicted RBP11.57□□□□□ -0.56
USP47-202ENST00000339865 LINC00303Q3SY05 128 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 TEX30Q5JUR7 227 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 SPPL3Q8TCT6 385 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 NAT6Q93015 286 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 TXLNGYQ9BZA5 131 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 Q9N2K0 584 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 IL17CQ9P0M4 197 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 LMTK2Q8IWU2 1503 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 RPS4Y1P22090 263 aaKnown RBP11.57□□□□□ -0.56
USP47-202ENST00000339865 SLC38A11Q08AI6 406 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 TMEM99Q8N816 258 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 OR10V1Q8NGI7 309 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 SH2D2AQ9NP31 389 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 ZMIZ1Q9ULJ6 1067 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 LRRK1Q38SD2 2015 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 DAOP14920 347 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 CCR2P41597 374 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 VEGFBP49765 207 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 PRSS8Q16651 343 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 NRSN2Q9GZP1 204 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 FOXJ3Q9UPW0 622 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 MFSD2BA6NFX1 497 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 CLDN18P56856 261 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 ROBO4Q8WZ75 1007 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 DMRTA2Q96SC8 542 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 LPAR3Q9UBY5 353 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 CST4P01036 141 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 EPXP11678 715 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 PTHLHP12272 177 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 MRPL54Q6P161 138 aaKnown RBP11.57□□□□□ -0.56
USP47-202ENST00000339865 FBXO17Q96EF6 278 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 PSG11Q9UQ72 335 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 GPX5O75715 221 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 SPATA46Q5T0L3 261 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 AGBL5Q8NDL9 886 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 RAXQ9Y2V3 346 aa11.57□□□□□ -0.56
USP47-202ENST00000339865 OR2W5A6NFC9 320 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SNURFLB1AK76 121 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 TNFSF15O95150 251 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 HPXP02790 462 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CD38P28907 300 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CEACAM6P40199 344 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 RPS23P62266 143 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms