RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CNTRLQ7Z7A1 2325 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 A0A1W2PR48 441 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 FITM1A5D6W6 292 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 GDF9O60383 454 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 MMP7P09237 267 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CHATP28329 748 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 GRPRP30550 384 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 TAGLN2P37802 199 aaKnown RBP4.91□□□□□ -1.62
CSDE1-202ENST00000339438 PRKAG1P54619 331 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 RAP1BP61224 184 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 RND3P61587 244 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 MAJINQ3KP22 176 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 ARHGAP11AQ6P4F7 1023 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 LHFPL1Q86WI0 220 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 LYG1Q8N1E2 194 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 SLC16A11Q8NCK7 471 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 PATE1Q8WXA2 126 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 C2orf50Q96LR7 162 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 NMNAT3Q96T66 252 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CHRNA10Q9GZZ6 450 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 ADAM29Q9UKF5 820 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 ENTPD2Q9Y5L3 495 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 KIF26BQ2KJY2 2108 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 KNTC1P50748 2209 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 A0A0B4J2E0 115 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 A0A1B0GX12 115 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 A0A1W2PPQ1 181 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 MED19A0JLT2 244 aaPredicted RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 EML2O95834 649 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 MBPP02686 304 aaPredicted RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 CSN2P05814 226 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 CHRM2P08172 466 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 RPL12P30050 165 aaKnown RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 CDK3Q00526 305 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 FDX2Q6P4F2 183 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 AMZ2Q86W34 360 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 TMEFF1Q8IYR6 380 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 MACROD1Q9BQ69 325 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 NUDT9Q9BW91 350 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 DNAJC4Q9NNZ3 241 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 FBXO34Q9NWN3 711 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 HS3ST3A1Q9Y663 406 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 ADGRG4Q8IZF6 3080 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 IGKV1-8A0A0C4DH67 115 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 A0A1W2PPV9 198 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 GLOD5A6NK44 160 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 A8MVM7 634 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 SIAH2O43255 324 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 TCF21O43680 179 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 CATP04040 527 aaKnown RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 CD55P08174 381 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 FBXO45P0C2W1 286 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 SLC35G6P0C7Q6 338 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 PSMB5P28074 263 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 MMP16P51512 607 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 RPS4XP62701 263 aaKnown RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 GNB2P62879 340 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 TRA2BP62995 288 aaKnown RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 SKP1P63208 163 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 UNC119Q13432 240 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 ARHGAP11BQ3KRB8 267 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 SOHLH1Q5JUK2 328 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 ADAMTSL4Q6UY14 1074 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 CENPVQ7Z7K6 275 aaPredicted RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 PLPP7Q8NBV4 271 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 RCBTB1Q8NDN9 531 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 OR9A1PQ8NGU1 263 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 OR2I1PQ8NGU4 316 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 OR14K1Q8NGZ2 314 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 OR10G6Q8NH81 332 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 RHBDD1Q8TEB9 315 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 TSLPQ969D9 159 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 PTX4Q96A99 478 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 BOD1Q96IK1 185 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 OR2M4Q96R27 311 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 AMELYQ99218 206 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 ABHD14AQ9BUJ0 271 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 REPIN1Q9BWE0 567 aaKnown RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 TCEAL2Q9H3H9 227 aaPredicted RBP4.9□□□□□ -1.62
CSDE1-202ENST00000339438 GPR35Q9HC97 309 aa4.9□□□□□ -1.62
CSDE1-202ENST00000339438 UNC13CQ8NB66 2214 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 A0A0A6YYH2 397 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 A0A1B0GU03 582 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 FEZF1A0PJY2 475 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 RBFOX3A6NFN3 312 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 A6NIZ1 184 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 A6NJ64 397 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 DFFBO76075 338 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 ADH1BP00325 375 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 UMODP07911 640 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 GZMHP20718 246 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 CXCR1P25024 350 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 CD82P27701 267 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 FCGR2CP31995 323 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 RAB11BQ15907 218 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 TMEM176BQ3YBM2 270 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-202ENST00000339438 FAM90A2PQ658T7 463 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 MFSD12Q6NUT3 480 aa4.9□□□□□ -1.63
CSDE1-202ENST00000339438 OPN5Q6U736 354 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms