RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 RAB19A4D1S5 217 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 RRP8O43159 456 aaKnown RBP13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 CER1O95813 267 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 KNG1P01042 644 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 IGHEP01854 428 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 CSTBP04080 98 aaKnown RBP13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 DEFA5Q01523 94 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 SCRN3Q0VDG4 424 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 RSU1Q15404 277 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 ATRAIDQ6UW56 229 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 PLXDC2Q6UX71 529 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 OR1F12Q8NHA8 337 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 LRRC46Q96FV0 321 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 ZNF2Q9BSG1 426 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 TMEM38BQ9NVV0 291 aa13.14□□□□□ -0.31
TNFSF13-201ENST00000338784 KMT2EQ8IZD2 1858 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 IGKV1D-8A0A087WSZ0 117 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 A0A0G2JMM0 328 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 A0A1W2PPB8 328 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 FAM230AA0A1W2PPH8 454 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 A0A1W2PRS3 328 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 KIR3DP1A8MWS1 328 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 IFNA2P01563 188 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 NTF4P34130 210 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 CHAF1BQ13112 559 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 CNN3Q15417 329 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 RPUSD3Q6P087 351 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 GGNQ86UU5 652 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 BOLLQ8N9W6 283 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 POC1AQ8NBT0 407 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 BHLHE23Q8NDY6 225 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 CPT1CQ8TCG5 803 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 RNF141Q8WVD5 230 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 AQP10Q96PS8 301 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 TMEM100Q9NV29 134 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 EDARQ9UNE0 448 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 MEMO1Q9Y316 297 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 PI4KAP42356 2102 aa13.13□□□□□ -0.31
TNFSF13-201ENST00000338784 MSGN1A6NI15 193 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 NUPL2O15504 423 aaKnown RBP13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 ANGPTL7O43827 346 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 LCATP04180 440 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 HOXB5P09067 269 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 ICAM2P13598 275 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 TCF15Q12870 199 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 RAB32Q13637 225 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 AAED1Q7RTV5 226 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 ZC4H2Q9NQZ6 224 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 C1orf123Q9NWV4 160 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 GSKIPQ9P0R6 139 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 DNAJB11Q9UBS4 358 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 SPTBN4Q9H254 2564 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 ZNF716A6NP11 495 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 SIGLEC5O15389 551 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 SPRY1O43609 319 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 B4GALT1P15291 398 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 PTGER4P35408 488 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 RBP2P50120 134 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 HGFACQ04756 655 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 IL15RAQ13261 267 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 TRIM61Q5EBN2 209 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 ZNF585AQ6P3V2 769 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 ALKBH3Q96Q83 286 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 HDHD3Q9BSH5 251 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 HSF4Q9ULV5 492 aa13.12□□□□□ -0.31
TNFSF13-201ENST00000338784 OR6C6A6NF89 314 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 CDK2AP1O14519 115 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 CXCL13O43927 109 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 PDGFBP01127 241 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 CTSDP07339 412 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 CD79AP11912 226 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 ZNF32P17041 273 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 OTX2P32243 289 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 HTR5AP47898 357 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 S100A10P60903 97 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 STK11Q15831 433 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 TAF9Q16594 264 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 ZNF528Q3MIS6 628 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 PPP1R32Q7Z5V6 425 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 OR51F2Q8NH61 342 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 LILRB1Q8NHL6 650 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 TMED6Q8WW62 240 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 BORCS8Q96FH0 119 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 FAAP24Q9BTP7 215 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 ACKR4Q9NPB9 350 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 TIMM10BQ9Y5J6 103 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 EML6Q6ZMW3 1958 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 FAM186AA6NE01 2351 aa13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 NCOA6Q14686 2063 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13-201ENST00000338784 IGKV1-27A0A075B6S5 117 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms