RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RAB27BO00194 218 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CTDSPLO15194 276 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 RPS27AP62979 156 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TRIQKQ629K1 86 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 WDR86Q86TI4 376 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CDH24Q86UP0 819 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF573Q86YE8 665 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 BATF2Q8N1L9 274 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZSCAN4Q8NAM6 433 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OR51T1Q8NGJ9 327 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 THAP7Q9BT49 309 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MRPL37Q9BZE1 423 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 NOP16Q9Y3C1 178 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-201ENST00000338399 EPG5Q9HCE0 2579 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 IGLV3-9A0A075B6K5 115 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 LINC00854A0A1B0GVQ3 168 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 A6NJ64 397 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 LANCL1O43813 399 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF780AO75290 641 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 C1QL1O75973 258 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SFTPBP07988 381 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 AGAP20933 346 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 NPBWR2P48146 333 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GPR176Q14439 515 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 RAB12Q6IQ22 244 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF808Q8N4W9 903 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CHST4Q8NCG5 386 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GTF3AQ92664 365 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SLAMF9Q96A28 289 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SLC22A4Q9H015 551 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 AUNIPQ9H7T9 357 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZMAT3Q9HA38 289 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PLCE1Q9P212 2302 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ICE1Q9Y2F5 2266 aa12.56□□□□□ -0.4
CDK5RAP3-201ENST00000338399 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ISPDA4D126 451 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 WIPF3A6NGB9 483 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 F5H5P2 479 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SOCS1O15524 211 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SYNGR1O43759 233 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TPPPO94811 219 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CHRM2P08172 466 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CD3GP09693 182 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GTF2F2P13984 249 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SELENOVP59797 346 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SCN1BQ07699 218 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 RGS21Q2M5E4 152 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 FAM76BQ5HYJ3 339 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MKXQ8IYA7 352 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OR10R2Q8NGX6 335 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 C15orf40Q8WUR7 153 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SMIM4Q8WVI0 70 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 YIPF5Q969M3 257 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MRPL24Q96A35 216 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 NKIRAS2Q9NYR9 191 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 IL36GQ9NZH8 169 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TAAR3PQ9P1P4 343 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CFAP46Q8IYW2 2715 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MEIOCA2RUB1 952 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 LRP5LA4QPB2 252 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SHISA9B4DS77 424 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GABARAPH6UMI1 98 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SCGNO76038 276 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CYB5AP00167 134 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GRPP07492 148 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CD3EP07766 207 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 BCL3P20749 454 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 FAM189A2Q15884 450 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 DMRTC2Q8IXT2 367 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SAXO1Q8IYX7 474 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 POC5Q8NA72 575 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 C19orf18Q8NEA5 215 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TRIM63Q969Q1 353 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PKIBQ9C010 78 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CXXC4Q9H2H0 198 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MTCH1Q9NZJ7 389 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ELF5Q9UKW6 265 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TBC1D24Q9ULP9 559 aa12.55□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PLSCR5A0PG75 271 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SIAH2O43255 324 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GSTZ1O43708 216 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 INPP1P49441 399 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TMEM50BP56557 158 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF154Q13106 437 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MAB21L1Q13394 359 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 RTN4RL2Q86UN3 420 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TMEM200AQ86VY9 491 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OSR2Q8N2R0 312 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 FAM89BQ8N5H3 189 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SCCPDHQ8NBX0 429 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms