RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
SEC13-201ENST00000337354 GP2P55259 537 aaKnown RBP12.92□□□□□ -0.34
SEC13-201ENST00000337354 FABP5Q01469 135 aa12.92□□□□□ -0.34
SEC13-201ENST00000337354 CALHM1Q8IU99 346 aa12.92□□□□□ -0.34
SEC13-201ENST00000337354 MKXQ8IYA7 352 aa12.92□□□□□ -0.34
SEC13-201ENST00000337354 LRRC29Q8WV35 223 aa12.92□□□□□ -0.34
SEC13-201ENST00000337354 C12orf43Q96C57 262 aaKnown RBP12.92□□□□□ -0.34
SEC13-201ENST00000337354 SLITRK2Q9H156 845 aa12.92□□□□□ -0.34
SEC13-201ENST00000337354 TMEM165Q9HC07 324 aa12.92□□□□□ -0.34
SEC13-201ENST00000337354 TRAV38-1A0A0B4J264 116 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 LGALS8O00214 317 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 GABRPO00591 440 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 RHBDL1O75783 438 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 HEXAP06865 529 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 MUC1P15941 1255 aaPredicted RBP12.91□□□□□ -0.34
SEC13-201ENST00000337354 PDZK1IP1Q13113 114 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 INSL4Q14641 139 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 TEX36Q5VZQ5 186 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 SAXO1Q8IYX7 474 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 SPICQ8N5J4 248 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 ZSCAN4Q8NAM6 433 aaPredicted RBP12.91□□□□□ -0.34
SEC13-201ENST00000337354 POC1AQ8NBT0 407 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 OR51A2Q8NGJ7 313 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 MRPS26Q9BYN8 205 aaKnown RBP12.91□□□□□ -0.34
SEC13-201ENST00000337354 METTL17Q9H7H0 456 aaPredicted RBP12.91□□□□□ -0.34
SEC13-201ENST00000337354 RHOFQ9HBH0 211 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 HIVEP1P15822 2718 aa12.91□□□□□ -0.34
SEC13-201ENST00000337354 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.34
SEC13-201ENST00000337354 TRAV8-7A0A075B6U6 113 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 A0A096LNT2 108 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 RNF223E7ERA6 249 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 PGA5P0DJD9 388 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 GLRA1P23415 457 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 FGF9P31371 208 aaPredicted RBP12.9□□□□□ -0.34
SEC13-201ENST00000337354 ZNF93P35789 620 aaPredicted RBP12.9□□□□□ -0.34
SEC13-201ENST00000337354 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 MICBQ29980 383 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 AVPI1Q5T686 147 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 DDI2Q5TDH0 399 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 SLC25A26Q70HW3 274 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 FAM90A1Q86YD7 464 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 Q8IYB0 196 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 PNLDC1Q8NA58 520 aaKnown RBP12.9□□□□□ -0.34
SEC13-201ENST00000337354 OR52N4Q8NGI2 321 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 FOXRED1Q96CU9 486 aaPredicted RBP12.9□□□□□ -0.34
SEC13-201ENST00000337354 ORAI1Q96D31 301 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 GPER1Q99527 375 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 SNTG1Q9NSN8 517 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 STUB1Q9UNE7 303 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 SSR3Q9UNL2 185 aa12.9□□□□□ -0.34
SEC13-201ENST00000337354 IGHV4-61A0A0C4DH41 118 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 ISPDA4D126 451 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 AKR7A2O43488 359 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 SYNGR1O43759 233 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 MAS1P04201 325 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 SMIM18P0DKX4 95 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 FOSL1P15407 271 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 CD36P16671 472 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 PSMD7P51665 324 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 TIMM50Q3ZCQ8 353 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 ZNF404Q494X3 552 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
SEC13-201ENST00000337354 SATL1Q86VE3 508 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 BOLLQ8N9W6 283 aaKnown RBP12.89□□□□□ -0.35
SEC13-201ENST00000337354 PXT1Q8NFP0 134 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 OR51F2Q8NH61 342 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 TMIGD2Q96BF3 282 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 GAL3ST1Q99999 423 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 NRIP2Q9BQI9 281 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 TMUB1Q9BVT8 246 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 PPIL3Q9H2H8 161 aaKnown RBP12.89□□□□□ -0.35
SEC13-201ENST00000337354 GSTK1Q9Y2Q3 226 aa12.89□□□□□ -0.35
SEC13-201ENST00000337354 TEP1Q99973 2627 aaKnown RBP12.89□□□□□ -0.35
SEC13-201ENST00000337354 H7C1Q1 480 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 ZNF205O95201 554 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 POU3F4P49335 361 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 ZP1P60852 638 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 FAM201AQ5SY85 155 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 FAM27D1Q5T7N8 215 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
SEC13-201ENST00000337354 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 GDPGP1Q6ZNW5 385 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 DCDC5Q6ZRR9 648 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 DEFB108BQ8NET1 73 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 CLDND2Q8NHS1 167 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 RAB39BQ96DA2 213 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 CEP19Q96LK0 163 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 SPACA5Q96QH8 159 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 TMEM246Q9BRR3 403 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 UQCC2Q9BRT2 126 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 DNTTIP1Q9H147 329 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 MTCH1Q9NZJ7 389 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 DNAJB11Q9UBS4 358 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 PCDHB10Q9UN67 800 aa12.88□□□□□ -0.35
SEC13-201ENST00000337354 TRAV1-2A0A0B4J238 106 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms