RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 ZNF716A6NP11 495 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 M0R1X1 148 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 GPX5O75715 221 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 CCR9P51686 369 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SLC35A2P78381 396 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 TBRG1Q3YBR2 411 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 GGNBP1Q5YKI7 109 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 OR2T2Q6IF00 324 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 AMER3Q8N944 861 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 C1orf162Q8NEQ5 155 aaPredicted RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 LGALS14Q8TCE9 139 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 APH1BQ8WW43 257 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 OR8B4Q96RC9 309 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 PRR14Q9BWN1 585 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 GABARAPL3Q9BY60 117 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 ACKR4Q9NPB9 350 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 YAE1D1Q9NRH1 226 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SIP14410 1827 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 J3QT63 122 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 FCMRO60667 390 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 KRASP01116 189 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SNRNP70P08621 437 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 HOXB5P09067 269 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 COX5AP20674 150 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 MC5RP33032 325 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 CD96P40200 585 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 CMC4P56277 68 aaPredicted RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 OR2B8PP59922 312 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 RAE1P78406 368 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SAMD13Q5VXD3 122 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 TBPL2Q6SJ96 375 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 CALHM1Q8IU99 346 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 TUSC5Q8IXB3 177 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 PCNPQ8WW12 178 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SCNM1Q9BWG6 230 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 OR51J1Q9H342 316 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 FNDC1Q4ZHG4 1894 aaPredicted RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 E5RGE8 158 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 TRIM77I1YAP6 450 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 NKX2-8O15522 239 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 LINC00271P0C7V0 271 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 HIST1H1EP10412 219 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 APOBEC3AP31941 199 aaPredicted RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 NCS1P62166 190 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 NKX6-1P78426 367 aaPredicted RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 FAHD2BQ6P2I3 314 aaPredicted RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 KIRREL2Q6UWL6 708 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 RBPMS2Q6ZRY4 209 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 ITPKCQ96DU7 683 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 FAHD2AQ96GK7 314 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 LNP1A1A4G5 178 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SMIM30A4D0T7 59 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 GAPDHP04406 335 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SULT1A3P0DMM9 295 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SULT1A4P0DMN0 295 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 CA6P23280 308 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 S100A4P26447 101 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 G0S2P27469 103 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SLC9A3R2Q15599 337 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 FAM219BQ5XKK7 198 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 ANKRD13BQ86YJ7 626 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 TMEM105Q8N8V8 129 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 OR10R2Q8NGX6 335 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 MED20Q9H944 212 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 PLEKHA2Q9HB19 425 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 MRPL15Q9P015 296 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 LEUTXA8MZ59 168 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 SOCS6O14544 535 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 LIPFP07098 398 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 COX5BP10606 129 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 CNN1P51911 297 aaKnown RBP6.5□□□□□ -1.37
EPHA3-201ENST00000336596 UBE2MP61081 183 aaKnown RBP6.5□□□□□ -1.37
EPHA3-201ENST00000336596 NKAIN4Q8IVV8 208 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 STPG3Q8N7X2 389 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 BBS1Q8NFJ9 593 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 SIGLEC11Q96RL6 698 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 SLC35D1Q9NTN3 355 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 PRNDQ9UKY0 176 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 A3GALT2U3KPV4 340 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 A0A1W2PPV9 198 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 RBP4P02753 201 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 ZNF14P17017 642 aaPredicted RBP6.5□□□□□ -1.37
EPHA3-201ENST00000336596 TGIF2LYQ8IUE0 185 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 TGIF2LXQ8IUE1 241 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 SLC25A45Q8N413 288 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 OR4D10Q8NGI6 311 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 MARS2Q96GW9 593 aaKnown RBP6.5□□□□□ -1.37
EPHA3-201ENST00000336596 OR2H1Q9GZK4 316 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 SLC25A10Q9UBX3 287 aaPredicted RBP6.5□□□□□ -1.37
EPHA3-201ENST00000336596 METRNQ9UJH8 293 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 OR6C68A6NDL8 312 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 TO15178 435 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 ARG1P05089 322 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 ZP4Q12836 540 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 KIAA0040Q15053 153 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 MPV17LQ2QL34 196 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 C4orf17Q53FE4 359 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 ZNF485Q8NCK3 441 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 OR4X2Q8NGF9 303 aa6.5□□□□□ -1.37
EPHA3-201ENST00000336596 OR5A2Q8NGI9 324 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms