RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 B2MP61769 119 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 EGR3Q06889 387 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 KIAA0141Q14154 515 aaPredicted RBP5.74□□□□□ -1.49
HMG20A-201ENST00000336216 SLC10A1Q14973 349 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 DEFB109BQ30KR1 87 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 C4orf17Q53FE4 359 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 RPL7L1Q6DKI1 246 aaKnown RBP5.74□□□□□ -1.49
HMG20A-201ENST00000336216 FAM213BQ8TBF2 198 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 ZNF721Q8TF20 911 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 SPSB2Q99619 263 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 GFI1Q99684 422 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 TRAPPC2LQ9UL33 140 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 A0A1W2PPH5 198 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 ANKUB1A6NFN9 424 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 OR4C45A6NMZ5 311 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 XRCC2O43543 280 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 SLC34A2O95436 690 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 ACTL6AO96019 429 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 TK1P04183 234 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 RCC1P18754 421 aaPredicted RBP5.74□□□□□ -1.49
HMG20A-201ENST00000336216 CLN3Q13286 438 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 KMT5CQ86Y97 462 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 TMEM104Q8NE00 496 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 ABHD3Q8WU67 409 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 ZCCHC4Q9H5U6 513 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 FZR1Q9UM11 496 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 PIEZO1Q92508 2521 aa5.74□□□□□ -1.49
HMG20A-201ENST00000336216 CSPG4Q6UVK1 2322 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 A0A1B0GTQ1 180 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SPAARA0A1B0GVQ0 90 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 A0A1W2PP11 408 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 C9orf170A2RU37 121 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 KLRC4-KLRK1H3BQV0 150 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PHF1O43189 567 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 LMX1BO60663 402 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PET100P0DJ07 73 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PTAFRP25105 342 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 HAAOP46952 286 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PCBD1P61457 104 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 INSM1Q01101 510 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PJVKQ0ZLH3 352 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 RAB32Q13637 225 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 CNN3Q15417 329 aaKnown RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 JMJD6Q6NYC1 403 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 FGF11Q92914 225 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 INTS12Q96CB8 462 aaKnown RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 FER1L6-AS2Q96M78 137 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 ZNF385AQ96PM9 386 aaKnown RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 DUSP15Q9H1R2 295 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 CNTD2Q9H8S5 307 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 HAO2Q9NYQ3 351 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 TNFSF18Q9UNG2 199 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 VSIG4Q9Y279 399 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 TRIOO75962 3097 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 ZNF814B7Z6K7 855 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 NXPH2O95156 264 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PNPP00491 289 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 IGHV3-13P01766 116 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 IGHV3-7P01780 117 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SMIM10L1P0DMW3 83 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 MUC1P15941 1255 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 S100PP25815 95 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 IL2RGP31785 369 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 RBP2P50120 134 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 F2RL1P55085 397 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 ACTBL2Q562R1 376 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PABPC1L2AQ5JQF8 200 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 FIP1L1Q6UN15 594 aaKnown RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SSX9Q7RTT3 188 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SLC36A1Q7Z2H8 476 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 CMTM1Q8IZ96 169 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 FBXL14Q8N1E6 418 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SDSLQ96GA7 329 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SMIM10Q96HG1 83 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 KLHDC3Q9BQ90 382 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 ZNF2Q9BSG1 426 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 EXOSC3Q9NQT5 275 aaKnown RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 ALPK3Q96L96 1907 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 IGF2RP11717 2491 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 TRAV14DV4A0A0A6YYC5 116 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 WDR1O75083 606 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 NRASP01111 189 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 ZNF32P17041 273 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 MST1P26927 711 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 EDDM3BP56851 147 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SHBQ15464 509 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 OR1C1Q15619 314 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 C6orf201Q7Z4U5 140 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 SLC26A10Q8NG04 563 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 OR10D3Q8NH80 312 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 REEP6Q96HR9 211 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 ARHGAP5-AS1Q96IT6 56 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 TRIB1Q96RU8 372 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 RTN4RQ9BZR6 473 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PRO1933Q9H354 126 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 TMEM9BQ9NQ34 198 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 KCNIP1Q9NZI2 227 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 MRPS18BQ9Y676 258 aaKnown RBP5.73□□□□□ -1.49
HMG20A-201ENST00000336216 AUP1Q9Y679 476 aa5.73□□□□□ -1.49
HMG20A-201ENST00000336216 PRR14LQ5THK1 2151 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms