RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 EGR1P18146 543 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 CD80P33681 288 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 CFHR2P36980 270 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 ALDH3B2P48448 385 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 GMFBP60983 142 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 IL24Q13007 206 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 FAM201AQ5SY85 155 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 SLC25A26Q70HW3 274 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 LRRTM1Q86UE6 522 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 GCSAMQ8N6F7 178 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 C19orf18Q8NEA5 215 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 WFDC11Q8NEX6 87 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 OR5D18Q8NGL1 313 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 OR10Z1Q8NGY1 313 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 CPNE2Q96FN4 548 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 ZNF488Q96MN9 340 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 NKX3-1Q99801 234 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 TXNL4BQ9NX01 149 aaKnown RBP11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 SCOCQ9UIL1 159 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 WIPI2Q9Y4P8 454 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 NPTNQ9Y639 398 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 MAST4O15021 2626 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 VPS13CQ709C8 3753 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 VWC2LB2RUY7 222 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 AKR7A2O43488 359 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 SPRY1O43609 319 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 LHBP01229 141 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 ADRA2CP18825 462 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 MPZP25189 248 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 ZNF93P35789 620 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 NR4A2P43354 598 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 BTG1P62324 171 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 PDZK1IP1Q13113 114 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 CRIP3Q6Q6R5 217 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 BATF2Q8N1L9 274 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 POC1AQ8NBT0 407 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 SLAMF9Q96A28 289 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 SNTG1Q9NSN8 517 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 GSTK1Q9Y2Q3 226 aa11.83□□□□□ -0.52
APOBEC3B-202ENST00000335760 PPIAL4EA0A075B759 164 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 ISPDA4D126 451 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 MEGF11A6BM72 1044 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 SRRM5B3KS81 715 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 PPIAL4DF5H284 164 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 WNT9BO14905 357 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 ANGPTL7O43827 346 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 CYB5AP00167 134 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 PPIAL4FP0DN26 164 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 TMEM225BP0DP42 221 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 SLC25A16P16260 332 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 MYL9P24844 172 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 ZP1P60852 638 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 ZMYND11Q15326 602 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 TIMM50Q3ZCQ8 353 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 SFRP4Q6FHJ7 346 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 GPR141Q7Z602 305 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 MKXQ8IYA7 352 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 JAGN1Q8N5M9 183 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 NKAIN3Q8N8D7 197 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 DEFB108BQ8NET1 73 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 OR51F2Q8NH61 342 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 TNFAIP8L1Q8WVP5 186 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 FUNDC2Q9BWH2 189 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 FAM192AQ9GZU8 254 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 MTCH1Q9NZJ7 389 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 PPIAL4AQ9Y536 164 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
APOBEC3B-202ENST00000335760 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 TRAV1-2A0A0B4J238 106 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 LGALS8O00214 317 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 AIREO43918 545 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 PGA5P0DJD9 388 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 GLRA1P23415 457 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 RPL5P46777 297 aaKnown RBP11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 OR3A4PP47883 348 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 GLT8D1Q68CQ7 371 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 LRRC28Q86X40 367 aaPredicted RBP11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 CDH26Q8IXH8 852 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 PNLDC1Q8NA58 520 aaKnown RBP11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 ZSCAN4Q8NAM6 433 aaPredicted RBP11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 SEH1LQ96EE3 360 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 CEP19Q96LK0 163 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 NRIP2Q9BQI9 281 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 WDR13Q9H1Z4 485 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 NARFLQ9H6Q4 476 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 RNF167Q9H6Y7 350 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 TMEM165Q9HC07 324 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 DNAJB11Q9UBS4 358 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 ING4Q9UNL4 249 aa11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 AK6Q9Y3D8 172 aaKnown RBP11.81□□□□□ -0.52
APOBEC3B-202ENST00000335760 TRAV38-1A0A0B4J264 116 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 IGHV4-61A0A0C4DH41 118 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 IGKV1-12A0A0C4DH73 117 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 SHISA3A0PJX4 238 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms