RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 HOXA6P31267 233 aa20.38■□□□□ 0.85
NDEL1-201ENST00000334527 OR1F12Q8NHA8 337 aa20.38■□□□□ 0.85
NDEL1-201ENST00000334527 FAAP24Q9BTP7 215 aa20.38■□□□□ 0.85
NDEL1-201ENST00000334527 OR2S2Q9NQN1 319 aa20.38■□□□□ 0.85
NDEL1-201ENST00000334527 C1orf123Q9NWV4 160 aa20.38■□□□□ 0.85
NDEL1-201ENST00000334527 MEMO1Q9Y316 297 aa20.38■□□□□ 0.85
NDEL1-201ENST00000334527 MSTNO14793 375 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 DNPH1O43598 174 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 LCATP04180 440 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 CST2P09228 141 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ECI1P42126 302 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 CARD18P57730 90 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 TAF9Q16594 264 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 TMEM200AQ86VY9 491 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 FOXRED2Q8IWF2 684 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ARL11Q969Q4 196 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 TMEM38BQ9NVV0 291 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 DNAJB11Q9UBS4 358 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ANXA10Q9UJ72 324 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 IGKV1-27A0A075B6S5 117 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ATP6V1G2-DDX39BF2Z307 99 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ATG12O94817 140 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ACTL6AO96019 429 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 P04436 131 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 PATE4P0C8F1 98 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 B4GALT1P15291 398 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 CTRB1P17538 263 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 SRD5A2P31213 254 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 CTRB2Q6GPI1 263 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 WDR5BQ86VZ2 330 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 SGCZQ96LD1 299 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ALKBH3Q96Q83 286 aaPredicted RBP20.37■□□□□ 0.85
NDEL1-201ENST00000334527 SLC5A7Q9GZV3 580 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 ZNF581Q9P0T4 197 aa20.37■□□□□ 0.85
NDEL1-201ENST00000334527 CNTRLQ7Z7A1 2325 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 DUSP3P51452 185 aaPredicted RBP20.36■□□□□ 0.85
NDEL1-201ENST00000334527 RBM39Q14498 530 aaKnown RBP20.36■□□□□ 0.85
NDEL1-201ENST00000334527 STK11Q15831 433 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 FAM122CQ6P4D5 195 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 GGNQ86UU5 652 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 AKR7LQ8NHP1 331 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 SLC39A7Q92504 469 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 TSNAXQ99598 290 aaKnown RBP20.36■□□□□ 0.85
NDEL1-201ENST00000334527 ABCD4O14678 606 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 FAM157CP0CG43 387 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 CNN3Q15417 329 aaKnown RBP20.36■□□□□ 0.85
NDEL1-201ENST00000334527 IAH1Q2TAA2 248 aaPredicted RBP20.36■□□□□ 0.85
NDEL1-201ENST00000334527 SGPP2Q8IWX5 399 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 PRO3102Q9H379 93 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 AK3Q9UIJ7 227 aa20.36■□□□□ 0.85
NDEL1-201ENST00000334527 ZNF32P17041 273 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 RRADP55042 308 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 SCRN3Q0VDG4 424 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 KCNE4Q8WWG9 221 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 CPNE2Q96FN4 548 aaPredicted RBP20.35■□□□□ 0.85
NDEL1-201ENST00000334527 EDARQ9UNE0 448 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 PRELID1Q9Y255 219 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 ZNF716A6NP11 495 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 ZNF705EA8MWA4 302 aaPredicted RBP20.35■□□□□ 0.85
NDEL1-201ENST00000334527 CXCL13O43927 109 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 CTSDP07339 412 aaPredicted RBP20.35■□□□□ 0.85
NDEL1-201ENST00000334527 OR5H8P0DN80 308 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 HTR5AP47898 357 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 RPS18P62269 152 aaKnown RBP20.35■□□□□ 0.85
NDEL1-201ENST00000334527 CCDC157Q569K6 752 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 AAED1Q7RTV5 226 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 CPT1CQ8TCG5 803 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 IER2Q9BTL4 223 aa20.35■□□□□ 0.85
NDEL1-201ENST00000334527 TRIOBPQ9H2D6 2365 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 GPR31O00270 319 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 RBP2P50120 134 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 SRSF3P84103 164 aaKnown RBP20.34■□□□□ 0.85
NDEL1-201ENST00000334527 UBALD2Q8IYN6 164 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 NAXEQ8NCW5 288 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 BORCS8Q96FH0 119 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 PADI1Q9ULC6 663 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 NCKAP5O14513 1909 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 OR6C6A6NF89 314 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 CRYM-AS1A6NIL9 109 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 RFPL3SP0C7P2 107 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 ADCYAP1P18509 176 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 OTX2P32243 289 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 OPRM1P35372 400 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 PDSS1Q5T2R2 415 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 FNDC9Q8TBE3 224 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 LPAR3Q9UBY5 353 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 HSF4Q9ULV5 492 aa20.34■□□□□ 0.85
NDEL1-201ENST00000334527 ZNF169Q14929 603 aaPredicted RBP20.33■□□□□ 0.85
NDEL1-201ENST00000334527 CMSS1Q9BQ75 279 aaKnown RBP20.33■□□□□ 0.85
NDEL1-201ENST00000334527 LIME1Q9H400 295 aa20.33■□□□□ 0.85
NDEL1-201ENST00000334527 MMP26Q9NRE1 261 aa20.33■□□□□ 0.85
NDEL1-201ENST00000334527 HKR1P10072 659 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 ZNF708P17019 499 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 RGS19P49795 217 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 PSG4Q00888 419 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 Q0VFX4 171 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 LHFPL2Q6ZUX7 228 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 CLRN3Q8NCR9 226 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 ADAMTS17Q8TE56 1095 aa20.32■□□□□ 0.84
NDEL1-201ENST00000334527 CNTNAP3BQ96NU0 1288 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms