RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FAM221BA6H8Z2 402 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
SYNE3-201ENST00000334258 GPR84Q9NQS5 396 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 ZNF727A8MUV8 499 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 TNFRSF10CO14798 259 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 DANCRP0C864 163 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 RPS2P15880 293 aaKnown RBP12.1□□□□□ -0.47
SYNE3-201ENST00000334258 ASCL1P50553 236 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 DAP3P51398 398 aaKnown RBP12.1□□□□□ -0.47
SYNE3-201ENST00000334258 SLC35A1P78382 337 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 HIST2H3AQ71DI3 136 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 GRINAQ7Z429 371 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 ARHGEF39Q8N4T4 335 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 ADAMTS18Q8TE60 1221 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 DAZLQ92904 295 aaKnown RBP12.1□□□□□ -0.47
SYNE3-201ENST00000334258 SH3BGRL3Q9H299 93 aa12.1□□□□□ -0.47
SYNE3-201ENST00000334258 KIR2DS5A0A0G2JLQ3 304 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 A0A0G2JNG1 304 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 FRG2CA6NGY1 282 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 KIR2DS3K7RE56 304 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 PPIHO43447 177 aaKnown RBP12.09□□□□□ -0.47
SYNE3-201ENST00000334258 SLC34A2O95436 690 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 HOXC4P09017 264 aaPredicted RBP12.09□□□□□ -0.47
SYNE3-201ENST00000334258 DRD1P21728 446 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 KIR2DS5Q14953 304 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 TMEM182Q6ZP80 229 aaPredicted RBP12.09□□□□□ -0.47
SYNE3-201ENST00000334258 MR1Q95460 341 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 PLEKHA2Q9HB19 425 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 GFOD1Q9NXC2 390 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 PRRC2CQ9Y520 2896 aaKnown RBP12.09□□□□□ -0.47
SYNE3-201ENST00000334258 MUC22E2RYF6 1773 aaPredicted RBP12.09□□□□□ -0.47
SYNE3-201ENST00000334258 BLACEA4D250 179 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 CEACAM18A8MTB9 384 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 H3BML4 177 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 ZNF205O95201 554 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 HOXA5P20719 270 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 AKT2P31751 481 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 BIDP55957 195 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 RPS23P62266 143 aaKnown RBP12.09□□□□□ -0.47
SYNE3-201ENST00000334258 RAB1AP62820 205 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 FAM189A2Q15884 450 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 PLXDC2Q6UX71 529 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 REC114Q7Z4M0 266 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 UBE2ZQ9H832 354 aaPredicted RBP12.09□□□□□ -0.47
SYNE3-201ENST00000334258 DOK5Q9P104 306 aa12.09□□□□□ -0.47
SYNE3-201ENST00000334258 A0A087X0M5 115 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 A0A1B0GX30 115 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 PPP1CCP36873 323 aaKnown RBP12.08□□□□□ -0.47
SYNE3-201ENST00000334258 FBXW4P57775 412 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 HSF1Q00613 529 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 RARRES2Q99969 163 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 NUDT16L1Q9BRJ7 211 aaKnown RBP12.08□□□□□ -0.47
SYNE3-201ENST00000334258 ZNF700Q9H0M5 742 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 PPP4R1LQ9P1A2 415 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 VDAC3Q9Y277 283 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 KCNIP3Q9Y2W7 256 aa12.08□□□□□ -0.47
SYNE3-201ENST00000334258 ALG1L2C9J202 215 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 OPN1LWP04000 364 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 SEC11BP0C7V7 166 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 THEGLP0DJG4 465 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 THBS4P35443 961 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.48
SYNE3-201ENST00000334258 CDX1P47902 265 aaPredicted RBP12.08□□□□□ -0.48
SYNE3-201ENST00000334258 RGS19P49795 217 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 AARDQ4LEZ3 155 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 OR5AS1Q8N127 324 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 ASB10Q8WXI3 467 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 TGM7Q96PF1 710 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 E5RGE8 158 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 NPIPB7O75200 414 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 ABCA11PQ4W5N1 156 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 CARD17Q5XLA6 110 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 FAM57BQ71RH2 274 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 H1FNTQ75WM6 255 aaPredicted RBP12.08□□□□□ -0.48
SYNE3-201ENST00000334258 WDFY1Q8IWB7 410 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 PRR18Q8N4B5 295 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF283Q8N7M2 679 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 LYPD6BQ8NI32 183 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 REEP6Q96HR9 211 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 GNRHR2Q96P88 292 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 NELFAQ9H3P2 528 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 OPA3Q9H6K4 179 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 FBLN5Q9UBX5 448 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 NSG2Q9Y328 171 aa12.08□□□□□ -0.48
SYNE3-201ENST00000334258 MS4A18H0YCH9 400 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 FOSL2P15408 326 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 CDAP32320 146 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF84P51523 738 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 AFF3P51826 1226 aaKnown RBP12.07□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF121P58317 390 aaPredicted RBP12.07□□□□□ -0.48
SYNE3-201ENST00000334258 UBE2KP61086 200 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 MS4A18Q3C1V0 323 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.07□□□□□ -0.48
SYNE3-201ENST00000334258 PADI1Q9ULC6 663 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 RCL1Q9Y2P8 373 aaKnown RBP12.07□□□□□ -0.48
SYNE3-201ENST00000334258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms