RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CRYM-AS1A6NIL9 109 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A8PA6NJQ4 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A7PA6NKC0 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A22PA8MWA6 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A12PA8MX19 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A5PA8MXJ8 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A23PA8MXZ1 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 CDK2AP1O14519 115 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 GAPDHP04406 335 aaKnown RBP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A15PP0C7V4 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A13PP0C7W8 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A14PP0C7W9 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM90A24PP0C7X0 464 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 TMEM225BP0DP42 221 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 ZNF32P17041 273 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 PTGER4P35408 488 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 RBMXP38159 391 aaKnown RBP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FUT6P51993 359 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 NUBP1P53384 320 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 UCP3P55916 312 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 GFRA1P56159 465 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 Q0VFX4 171 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 ATXN7L3Q14CW9 347 aaPredicted RBP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 RSU1Q15404 277 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 SLC9A3R2Q15599 337 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 SRSF7Q16629 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 CCDC157Q569K6 752 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 ACER2Q5QJU3 275 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 FAM74A1Q5RGS3 127 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 IL34Q6ZMJ4 242 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 SGPP2Q8IWX5 399 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 NPRL2Q8WTW4 380 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 RRNAD1Q96FB5 475 aaKnown RBP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 BORCS8Q96FH0 119 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 SPRY4Q9C004 299 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 SLC6A15Q9H2J7 730 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 CRLF2Q9HC73 371 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 GPR173Q9NS66 373 aa9.35□□□□□ -0.91
CCDC172-201ENST00000333254 MCTS1Q9ULC4 181 aaKnown RBP9.35□□□□□ -0.91
CCDC172-201ENST00000333254 PCSK5Q92824 1860 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 RPL36A-HNRNPH2H7BZ11 118 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 LGALS8O00214 317 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 ADAP1O75689 374 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 MMP7P09237 267 aaPredicted RBP9.34□□□□□ -0.91
CCDC172-201ENST00000333254 COX5BP10606 129 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 GLRA1P23415 457 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 HGFACQ04756 655 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 ZNF774Q6NX45 483 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 C6orf15Q6UXA7 325 aaPredicted RBP9.34□□□□□ -0.91
CCDC172-201ENST00000333254 Q6ZS49 121 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 COLCA1Q6ZS62 124 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 C6orf201Q7Z4U5 140 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 OR10D3Q8NH80 312 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 ARL11Q969Q4 196 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 OR10C1Q96KK4 312 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 CNTNAP3BQ96NU0 1288 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 C1QTNF5Q9BXJ0 243 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 CNTNAP3Q9BZ76 1288 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 SLC5A7Q9GZV3 580 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 WNT5BQ9H1J7 359 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 METTL8Q9H825 291 aaKnown RBP9.34□□□□□ -0.91
CCDC172-201ENST00000333254 RNF122Q9H9V4 155 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 BCO1Q9HAY6 547 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 GPR35Q9HC97 309 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 ZFP57Q9NU63 452 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 NECAP2Q9NVZ3 263 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 BOKQ9UMX3 212 aaPredicted RBP9.34□□□□□ -0.91
CCDC172-201ENST00000333254 PCDHB10Q9UN67 800 aa9.34□□□□□ -0.91
CCDC172-201ENST00000333254 IGKV1-27A0A075B6S5 117 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 A0A0G2JMM0 328 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 ZNF816-ZNF321PA0A0X1KG74 233 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 A0A1W2PPB8 328 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 A0A1W2PRS3 328 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 PMS2P1A4D2B8 440 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 KIR3DP1A8MWS1 328 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 PATE3B3GLJ2 98 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 G3V3Y1 287 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 SDCBPO00560 298 aaPredicted RBP9.33□□□□□ -0.92
CCDC172-201ENST00000333254 CXCL13O43927 109 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 HTR3BO95264 441 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 FARS2O95363 451 aaKnown RBP9.33□□□□□ -0.92
CCDC172-201ENST00000333254 NRASP01111 189 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 LCATP04180 440 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 FCGR3AP08637 254 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 NTF4P34130 210 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 HTR5AP47898 357 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 CYB561P49447 251 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 ZXDAP98168 799 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 FAM3AP98173 230 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 PSG4Q00888 419 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 AIMP2Q13155 320 aaKnown RBP9.33□□□□□ -0.92
CCDC172-201ENST00000333254 RBM39Q14498 530 aaKnown RBP9.33□□□□□ -0.92
CCDC172-201ENST00000333254 CEACAM16Q2WEN9 425 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 BEX5Q5H9J7 111 aa9.33□□□□□ -0.92
CCDC172-201ENST00000333254 YRDCQ86U90 279 aaKnown RBP9.33□□□□□ -0.92
CCDC172-201ENST00000333254 SAXO1Q8IYX7 474 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms