RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 WFDC1Q9HC57 220 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 QDPRP09417 244 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 PRF1P14222 555 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 FAHP16930 419 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 ZNF41P51814 821 aaPredicted RBP20.69■□□□□ 0.9
TSKU-201ENST00000333090 RPUSD3Q6P087 351 aaKnown RBP20.69■□□□□ 0.9
TSKU-201ENST00000333090 COMMD1Q8N668 190 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 PIGTQ969N2 578 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 ADAMTS9Q9P2N4 1935 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 BORCS7-ASMTA0A0B4J1R7 106 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 ZNF814B7Z6K7 855 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 MASP2O00187 686 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 TRAF3IP2O43734 574 aaPredicted RBP20.69■□□□□ 0.9
TSKU-201ENST00000333090 PIGPP57054 158 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 UBE2V2Q15819 145 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 TMEM156Q8N614 296 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 SLC25A43Q8WUT9 341 aaPredicted RBP20.69■□□□□ 0.9
TSKU-201ENST00000333090 TCTEX1D2Q8WW35 142 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 LYZL4Q96KX0 146 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 SH3BGRL3Q9H299 93 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 SDHAF3Q9NRP4 125 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 C19orf12Q9NSK7 152 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 E5RGE8 158 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 SEC11BP0C7V7 166 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 GLI4P10075 376 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 NME1P15531 152 aaKnown RBP20.69■□□□□ 0.9
TSKU-201ENST00000333090 S100PP25815 95 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 OR1D5P58170 312 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 SLC25A47Q6Q0C1 308 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 HSD17B11Q8NBQ5 300 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 KCNJ16Q9NPI9 418 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 NSG2Q9Y328 171 aa20.69■□□□□ 0.9
TSKU-201ENST00000333090 NCOA6Q14686 2063 aaPredicted RBP20.68■□□□□ 0.9
TSKU-201ENST00000333090 TRBV23-1A0A0A0MS06 115 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 F5H5K5 113 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 OR13C7P0DN81 318 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 TMEM225BP0DP42 221 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 PMELP40967 661 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 ECI1P42126 302 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 SUMO3P55854 103 aaPredicted RBP20.68■□□□□ 0.9
TSKU-201ENST00000333090 OR1J1Q8NGS3 322 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 PPP4R1LQ9P1A2 415 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 RAMP1O60894 148 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 OR5H8P0DN80 308 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 SMAD4Q13485 552 aaKnown RBP20.68■□□□□ 0.9
TSKU-201ENST00000333090 ABCA7Q8IZY2 2146 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 ZNF565Q8N9K5 539 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 KDF1Q8NAX2 398 aaPredicted RBP20.68■□□□□ 0.9
TSKU-201ENST00000333090 ARV1Q9H2C2 271 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 TINAGQ9UJW2 476 aa20.68■□□□□ 0.9
TSKU-201ENST00000333090 A0A1B0GX78 115 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 SLC35A1P78382 337 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 ACER2Q5QJU3 275 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 APCDD1LQ8NCL9 501 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 AP4M1O00189 453 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 MYF5P13349 255 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 EIF2S3P41091 472 aaKnown RBP20.67■□□□□ 0.9
TSKU-201ENST00000333090 NCMAPQ5T1S8 102 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 TSPO2Q5TGU0 170 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 EDARADDQ8WWZ3 215 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 LIME1Q9H400 295 aa20.67■□□□□ 0.9
TSKU-201ENST00000333090 OR5AC1P0C628 307 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 ALDH3B1P43353 468 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 P2RY1P47900 373 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 RRADP55042 308 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 UCP2P55851 309 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 GRB2P62993 217 aaKnown RBP20.66■□□□□ 0.9
TSKU-201ENST00000333090 DTX1Q86Y01 620 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 GNRHR2Q96P88 292 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 TM2D1Q9BX74 207 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 SLC35B3Q9H1N7 401 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 ZNF160Q9HCG1 818 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 ANXA10Q9UJ72 324 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 KCNIP3Q9Y2W7 256 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 ZNF43P17038 809 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 KLK2P20151 261 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 ARL6IP1Q15041 203 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 RHEBQ15382 184 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 RSPO4Q2I0M5 234 aaPredicted RBP20.66■□□□□ 0.9
TSKU-201ENST00000333090 LYZL2Q7Z4W2 148 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 POC1BQ8TC44 478 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 WDFY4Q6ZS81 3184 aa20.66■□□□□ 0.9
TSKU-201ENST00000333090 SFTPDP35247 375 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 OPRM1P35372 400 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 OGFOD3Q6PK18 319 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 PLXDC2Q6UX71 529 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 SLC38A9Q8NBW4 561 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 REEP6Q96HR9 211 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 MRGPRX4Q96LA9 322 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 GINS3Q9BRX5 216 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 BCL2L14Q9BZR8 327 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 LMAN1LQ9HAT1 526 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 ZNF726A6NNF4 738 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 FXYD4P59646 89 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 PLPPR5Q32ZL2 321 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 ABCA11PQ4W5N1 156 aa20.65■□□□□ 0.9
TSKU-201ENST00000333090 COL6A3P12111 3177 aa20.64■□□□□ 0.9
TSKU-201ENST00000333090 ZNF850A8MQ14 1090 aa20.64■□□□□ 0.9
TSKU-201ENST00000333090 RRP8O43159 456 aaKnown RBP20.64■□□□□ 0.9
TSKU-201ENST00000333090 IGHV2-70P01814 119 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms