RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 SOD3P08294 240 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 GP1BBP13224 206 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 SERPINA2P20848 420 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 DHPSP49366 369 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 ZXDAP98168 799 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 ACY1Q03154 408 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 ELOBQ15370 118 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 KHDC3LQ587J8 217 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 GFI1BQ5VTD9 330 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 DNM1P34Q6PK57 102 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 KLHL24Q6TFL4 600 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 RAB39BQ96DA2 213 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 JSRP1Q96MG2 331 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 TGM7Q96PF1 710 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 GPR61Q9BZJ8 451 aa15.92■□□□□ 0.14
CLSTN3-202ENST00000331148 TMED7-TICAM2A0A0A6YYA0 188 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 IGKV1D-43A0A0B4J1Z2 117 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 ZNF726A6NNF4 738 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 C17orf105B2RV13 164 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 LMO7DNF2Z398 122 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 GPR137BO60478 399 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 MBPP02686 304 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 HOXA6P31267 233 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 APOBEC1P41238 236 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 HSD11B2P80365 405 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 HIKESHIQ53FT3 197 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 PDZD11Q5EBL8 140 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 FAM213BQ8TBF2 198 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 SLAMF6Q96DU3 332 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 ELOA3CA0A087WX78 387 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 A0A087X0M5 115 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 CCDC163A0A0D9SF12 145 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 A0A1B0GX30 115 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 BLACEA4D250 179 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 H3BQ15 152 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 LSM6P62312 80 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 DEFB133Q30KQ1 61 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 WDFY1Q8IWB7 410 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 SGPP2Q8IWX5 399 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 HSD17B11Q8NBQ5 300 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 OR51E1Q8TCB6 317 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 NELFAQ9H3P2 528 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 SMDT1Q9H4I9 107 aa15.91■□□□□ 0.14
CLSTN3-202ENST00000331148 SPAG17Q6Q759 2223 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 K7N7A8 449 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 NSA2O95478 260 aaKnown RBP15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 PDGFBP01127 241 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 TAGLN2P37802 199 aaKnown RBP15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 SLC37A1P57057 533 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 SSX2Q16385 188 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 PRTGQ2VWP7 1150 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 CHRFAM7AQ494W8 412 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 PLXDC2Q6UX71 529 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 TMEM182Q6ZP80 229 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 SULF2Q8IWU5 870 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 URM1Q9BTM9 101 aaKnown RBP15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 OR10A2Q9H208 303 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 PRO1933Q9H354 126 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 HS3ST3B1Q9Y662 390 aa15.9■□□□□ 0.14
CLSTN3-202ENST00000331148 A0A087WWC5 75 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 BTBD17A6NE02 478 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 CRYM-AS1A6NIL9 109 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 A6NIZ1 184 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 TSTD3H0UI37 97 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 TERTO14746 1132 aaKnown RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 PIAS2O75928 621 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 PGCP20142 388 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 POLR2HP52434 150 aaKnown RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 CD81P60033 236 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 RAP1BP61224 184 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 NKX6-1P78426 367 aaPredicted RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 UBE2V2Q15819 145 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 OGFOD3Q6PK18 319 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 C17orf82Q86X59 251 aaPredicted RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 ASB10Q8WXI3 467 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 C5orf34Q96MH7 638 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 ATXN7L1Q9ULK2 861 aaPredicted RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 ARID1BQ8NFD5 2236 aaPredicted RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 THADAQ6YHU6 1953 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 TLCD2A6NGC4 264 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 XRCC2O43543 280 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 HPNP05981 417 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 HEXBP07686 556 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 IL11P20809 199 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 ERVFRD-1P60508 538 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 METTL27Q8N6F8 245 aaPredicted RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 DAZLQ92904 295 aaKnown RBP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 SSX3Q99909 188 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 TGIF2Q9GZN2 237 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 URGCP-MRPS24S4R325 110 aa15.89■□□□□ 0.13
CLSTN3-202ENST00000331148 TGIF2-C20orf24A0A0A6YYL0 155 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 OR5H15A6NDH6 313 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 OR5H1A6NKK0 313 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 ZNF724A8MTY0 619 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 CTSDP07339 412 aaPredicted RBP15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 HCKP08631 526 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 UBE2KP61086 200 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 FAM189A2Q15884 450 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms