RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 KDM4DQ6B0I6 523 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 KCTD18Q6PI47 426 aaPredicted RBP11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 LYPD4Q6UWN0 246 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 FAM90A1Q86YD7 464 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 THEM6Q8WUY1 208 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 ZNRF4Q8WWF5 429 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 PYDC1Q8WXC3 89 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 SLC22A4Q9H015 551 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 KIAA1109Q2LD37 5005 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 A0A1B0GW55 424 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 GGT3PA6NGU5 568 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 XRCC2O43543 280 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 LYNP07948 512 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 CFL1P23528 166 aaKnown RBP11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 CD200P41217 278 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 TIGD4Q8IY51 512 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 RNF133Q8WVZ7 376 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 ABHD6Q9BV23 337 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 NIPAL2Q9H841 368 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 ZMAT4Q9H898 229 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 EDA2RQ9HAV5 297 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 LAMP5Q9UJQ1 280 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 OAZ3Q9UMX2 235 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 SF3B6Q9Y3B4 125 aaKnown RBP11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 N6AMT1Q9Y5N5 214 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 TMEM14AQ9Y6G1 99 aa11.85□□□□□ -0.51
CTHRC1-201ENST00000330295 SAC3D1A6NKF1 404 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 MITFO75030 526 aaPredicted RBP11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 ANXA2P07355 339 aaKnown RBP11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 SNRPBP14678 240 aaKnown RBP11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 OTX1P32242 354 aaPredicted RBP11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 CX3CR1P49238 355 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 MZT1Q08AG7 82 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 POU4F2Q12837 409 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 APOFQ13790 326 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 GK2Q14410 553 aaPredicted RBP11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 SNCBQ16143 134 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 SLX4IPQ5VYV7 408 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 HCP5Q6MZN7 132 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 LHFPL2Q6ZUX7 228 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 GID4Q8IVV7 300 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 OTOSQ8NHW6 89 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 CIB1Q99828 191 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 OR10A2Q9H208 303 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 METTL8Q9H825 291 aaKnown RBP11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 TCF19Q9Y242 345 aa11.84□□□□□ -0.51
CTHRC1-201ENST00000330295 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 ZAR1LA6NP61 321 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 TBX1O43435 398 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 DDOSTP39656 456 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 THBS3P49746 956 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 CDC42P60953 191 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 BLCAPP62952 87 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 IL5RAQ01344 420 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 TIGD6Q17RP2 521 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 CENPVQ7Z7K6 275 aaPredicted RBP11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 NAA40Q86UY6 237 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 TMEM219Q86XT9 240 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 FTMTQ8N4E7 242 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 TCEANCQ8N8B7 351 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 OR4X2Q8NGF9 303 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 TMEM163Q8TC26 289 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 ASB17Q8WXJ9 295 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 STMN2Q93045 179 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 MNTQ99583 582 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 TEAD3Q99594 435 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 RIBC2Q9H4K1 309 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 RGCCQ9H4X1 137 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 SMAD5-AS1Q9Y6J3 95 aa11.83□□□□□ -0.52
CTHRC1-201ENST00000330295 NKX6-3A6NJ46 265 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 CD300LBA8K4G0 201 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 M0R1W7 72 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 PRKYO43930 277 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 SELENOFO60613 162 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 NAA10P41227 235 aaPredicted RBP11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 NXNL2Q5VZ03 156 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 DEGS2Q6QHC5 323 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 BBS1Q8NFJ9 593 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 PGAM5Q96HS1 289 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 CNN2Q99439 309 aaKnown RBP11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF649Q9BS31 505 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 MROQ9BYG7 248 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 IMPAD1Q9NX62 359 aa11.82□□□□□ -0.52
CTHRC1-201ENST00000330295 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 A6NDX4 124 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 ANKRD30BLA7E2S9 258 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 VGLL3A8MV65 326 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 GMDSO60547 372 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms