RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PCDHGA1Q9Y5H4 931 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 IGLV3-12A0A075B6K2 115 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ZNHIT1O43257 154 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 XRCC2O43543 280 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 PATE4P0C8F1 98 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 TMEM225BP0DP42 221 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 HOXA6P31267 233 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 RBMXP38159 391 aaKnown RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 RAB13P51153 203 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 FXYD4P59646 89 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 DCDP81605 110 aaKnown RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ECH1Q13011 328 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 IL15RAQ13261 267 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ZNF528Q3MIS6 628 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 AARDQ4LEZ3 155 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 C10orf91Q5T1B1 145 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ERGIC1Q969X5 290 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 REEP6Q96HR9 211 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 MEX3AA1L020 520 aaKnown RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 FOXI3A8MTJ6 420 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 RNASEK-C17orf49H0YIS7 233 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ETV2O00321 342 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 IFNA2P01563 188 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 TMEM11P17152 192 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 CSNK1A1P48729 337 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 FHITP49789 147 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 TAS2R46P59540 309 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ENDOGQ14249 297 aaKnown RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 HIST3H3Q16695 136 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 CYB5R2Q6BCY4 276 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 WDR74Q6RFH5 385 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 Q6ZRG5 221 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 OR5L2Q8NGL0 311 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 SPACA9Q96E40 222 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 SEC11CQ9BY50 192 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ZNF576Q9H609 170 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 PLEK2Q9NYT0 353 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 SEMA5BQ9P283 1151 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ZNF407Q9C0G0 2248 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 FAM230AA0A1W2PPH8 454 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 AQP7P3A6NL99 342 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 DIRAS3O95661 229 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 LYL1P12980 280 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 RAC2P15153 192 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 ACKR3P25106 362 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 RPL12P30050 165 aaKnown RBP15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 FCGR2CP31995 323 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 CAV2P51636 162 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 SLC25A53Q5H9E4 307 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 SULF2Q8IWU5 870 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 CADM4Q8NFZ8 388 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 AKR1E2Q96JD6 320 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 MTCH2Q9Y6C9 303 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 K7EPK0 472 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 NOVA1P51513 510 aaKnown RBP15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 TMEM33P57088 247 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 GRB2P62993 217 aaKnown RBP15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 RAET1LQ5VY80 246 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 FAM71E2Q8N5Q1 922 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 SECTM1Q8WVN6 248 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 SMIM8Q96KF7 97 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 PIGQQ9BRB3 760 aa15.18■□□□□ 0.02
PTP4A3-201ENST00000329397 CCDC85CA6NKD9 419 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 DHRS3O75911 302 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 C1QL1O75973 258 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 PRF1P14222 555 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 MSR1P21757 451 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 RFC3P40938 356 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 GUCA1AP43080 201 aaPredicted RBP15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 PPT1P50897 306 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 AFF3P51826 1226 aaKnown RBP15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 SHBQ15464 509 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 GGNBP1Q5YKI7 109 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 DHRS11Q6UWP2 260 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 RNF138Q8WVD3 245 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 EMG1Q92979 244 aaKnown RBP15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 ZPBPQ9BS86 351 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 C20orf24Q9BUV8 137 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 CNTNAP3Q9BZ76 1288 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 ZFP57Q9NU63 452 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 NXT1Q9UKK6 140 aaKnown RBP15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 ASCL1P50553 236 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 PHLDA2Q53GA4 152 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 IL34Q6ZMJ4 242 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 RABEPKQ7Z6M1 372 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 FNDC9Q8TBE3 224 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 FBXO17Q96EF6 278 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 SCGB3A2Q96PL1 93 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 PISDQ9UG56 409 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 CBY1Q9Y3M2 126 aa15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 CHCHD2Q9Y6H1 151 aaPredicted RBP15.17■□□□□ 0.02
PTP4A3-201ENST00000329397 FIGNL2A6NMB9 653 aa15.16■□□□□ 0.02
PTP4A3-201ENST00000329397 M0R135 149 aa15.16■□□□□ 0.02
PTP4A3-201ENST00000329397 NME2P1O60361 137 aa15.16■□□□□ 0.02
PTP4A3-201ENST00000329397 MSX1P28360 303 aa15.16■□□□□ 0.02
PTP4A3-201ENST00000329397 F2RL1P55085 397 aa15.16■□□□□ 0.02
PTP4A3-201ENST00000329397 MTCP1P56278 107 aa15.16■□□□□ 0.02
PTP4A3-201ENST00000329397 CCL7P80098 99 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms