RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GPR137CQ8N3F9 429 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 WDSUB1Q8N9V3 476 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 RNASE11Q8TAA1 199 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC25A43Q8WUT9 341 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 RTN4IP1Q8WWV3 396 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 ISOC2Q96AB3 205 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 FBXO17Q96EF6 278 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 OR51B6Q9H340 312 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 FBXO7Q9Y3I1 522 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 SPP1P10451 314 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 RFC3P40938 356 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 EIF1P41567 113 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 GLP1RP43220 463 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 TGIF1Q15583 401 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 KMT5CQ86Y97 462 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 FBXL14Q8N1E6 418 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 ZC3H10Q96K80 434 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 GPHA2Q96T91 129 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 SPSB2Q99619 263 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 NAA11Q9BSU3 229 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 EDARQ9UNE0 448 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 HDGFL3Q9Y3E1 203 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 OR5AC1P0C628 307 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 OR8U9P0C7N5 309 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF17P17021 662 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 SHBQ15464 509 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 PIGYQ3MUY2 71 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 AVPI1Q5T686 147 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 AADACL3Q5VUY0 350 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 PLCXD3Q63HM9 321 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC30A7Q8NEW0 376 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 OR8U1Q8NH10 309 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 ZFP57Q9NU63 452 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 NDRG3Q9UGV2 375 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 AQP7P3A6NL99 342 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 CRYBA1P05813 215 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 FHITP49789 147 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 LPAL2Q16609 132 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 WDR74Q6RFH5 385 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 PRRX2Q99811 253 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF175Q9Y473 711 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 SVILO95425 2214 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF407Q9C0G0 2248 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 SERPINE3A8MV23 424 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 OPN5Q6U736 354 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 LYZL2Q7Z4W2 148 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 FAM213BQ8TBF2 198 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 CHRNA10Q9GZZ6 450 aa11.29□□□□□ -0.6
HMGCS1-201ENST00000325110 TMEM131Q92545 1883 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 BORCS7-ASMTA0A0B4J1R7 106 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 IGHV5-10-1A0A0J9YXX1 117 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 A0A1W2PNV4 684 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 OR13C7P0DN81 318 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 PPA1Q15181 289 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 MIDNQ504T8 468 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 PABPC1L2AQ5JQF8 200 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 LYSMD4Q5XG99 296 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 OR9K2Q8NGE7 335 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 C1orf147Q96MC9 270 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 BIN3Q9NQY0 253 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 CYTL1Q9NRR1 136 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 CXCL13O43927 109 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 S100A9P06702 114 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 HLA-GP17693 338 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 DUSP1P28562 367 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 THBS4P35443 961 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 GSK3AP49840 483 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 RPS19BP1Q86WX3 136 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 LYPD6Q86Y78 171 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 OR11L1Q8NGX0 322 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 SPACA1Q9HBV2 294 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 AK3Q9UIJ7 227 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 UBE2J1Q9Y385 318 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 LRP4O75096 1905 aa11.28□□□□□ -0.6
HMGCS1-201ENST00000325110 WRBO00258 174 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 CCL4P13236 92 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 RAB13P51153 203 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 SSR4P51571 173 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 PLXDC2Q6UX71 529 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 AAED1Q7RTV5 226 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC16A14Q7RTX9 510 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 TMEM217Q8N7C4 229 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 OR6S1Q8NH40 331 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 OCSTAMPQ9BR26 566 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 UBE2ZQ9H832 354 aaPredicted RBP11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC7A11Q9UPY5 501 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 ST3GAL6Q9Y274 331 aa11.27□□□□□ -0.6
HMGCS1-201ENST00000325110 CACNA1DQ01668 2161 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms