RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 LSAMPQ13449 338 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 PDCD1Q15116 288 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 FAM76BQ5HYJ3 339 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 PNLDC1Q8NA58 520 aaKnown RBP12.94□□□□□ -0.34
PRPF3-201ENST00000324862 ITFG2Q969R8 447 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 FBXW5Q969U6 566 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 RBFOX1Q9NWB1 397 aaKnown RBP12.94□□□□□ -0.34
PRPF3-201ENST00000324862 ABRACLQ9P1F3 81 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 OR5B21A6NL26 309 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 AKR7A2O43488 359 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 CD8AP01732 235 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 BMP4P12644 408 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 SWI5Q1ZZU3 235 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 TSC22D3Q99576 134 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 NICN1Q9BSH3 213 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 DCAF16Q9NXF7 216 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 LAMP3Q9UQV4 416 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 A6NLC8 198 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 C17orf100A8MU93 164 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 LDLRAD4O15165 306 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 BCL3P20749 454 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 RIN1Q13671 783 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 MOGAT2Q3SYC2 334 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 AQP3Q92482 292 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 KCTD12Q96CX2 325 aaKnown RBP12.93□□□□□ -0.34
PRPF3-201ENST00000324862 SPOCK3Q9BQ16 436 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 DYNLRB1Q9NP97 96 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 CRTAPO75718 401 aaPredicted RBP12.93□□□□□ -0.34
PRPF3-201ENST00000324862 LY6HO94772 140 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 HTR3BO95264 441 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 MPIG6BO95866 241 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 PTHLHP12272 177 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 PMELP40967 661 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 CNIH2Q6PI25 160 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 C19orf18Q8NEA5 215 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 WDR13Q9H1Z4 485 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
PRPF3-201ENST00000324862 FAM25AB3EWG3 89 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 FAM25CB3EWG5 89 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 FAM25GB3EWG6 89 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 B9A039 149 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 HS3ST1O14792 307 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 WNT9BO14905 357 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 CTAG2O75638 210 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 DANCRP0C864 163 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 TNFAIP6P98066 277 aaPredicted RBP12.92□□□□□ -0.34
PRPF3-201ENST00000324862 EFNB3Q15768 340 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 PIGYQ3MUY2 71 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 ZNF573Q86YE8 665 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 CDH26Q8IXH8 852 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 FBXL14Q8N1E6 418 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 OR4M1Q8NGD0 313 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 ACOT12Q8WYK0 555 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 GCDHQ92947 438 aaPredicted RBP12.92□□□□□ -0.34
PRPF3-201ENST00000324862 DIRAS2Q96HU8 199 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 VRK1Q99986 396 aaPredicted RBP12.92□□□□□ -0.34
PRPF3-201ENST00000324862 CLEC4MQ9H2X3 399 aaPredicted RBP12.92□□□□□ -0.34
PRPF3-201ENST00000324862 RHBDL2Q9NX52 303 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 PEX16Q9Y5Y5 336 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 A3GALT2U3KPV4 340 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 A0A0A6YYD4 124 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 LRP5LA4QPB2 252 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 TMEM14DPA8MWL7 114 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 VSTM5A8MXK1 200 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 ZNF205O95201 554 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 TFF1P04155 84 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 DUSP1P28562 367 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 S100A5P33763 92 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 RSU1Q15404 277 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 FAM201AQ5SY85 155 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 MZT2AQ6P582 158 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 SNX29P2Q8IUI4 249 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 NRGNQ92686 78 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 S100A13Q99584 98 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 SLC22A4Q9H015 551 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 ZMAT3Q9HA38 289 aaKnown RBP12.92□□□□□ -0.34
PRPF3-201ENST00000324862 C1orf123Q9NWV4 160 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 NKIRAS2Q9NYR9 191 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 SPG11Q96JI7 2443 aa12.92□□□□□ -0.34
PRPF3-201ENST00000324862 CHD3Q12873 2000 aaKnown RBP12.91□□□□□ -0.34
PRPF3-201ENST00000324862 USF3Q68DE3 2245 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.91□□□□□ -0.34
PRPF3-201ENST00000324862 hCG_1807616A0A1W2PRN6 198 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 FAM221AA4D161 298 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 TPD52L2O43399 206 aaKnown RBP12.91□□□□□ -0.34
PRPF3-201ENST00000324862 CDC14BO60729 498 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 BPNT1O95861 308 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 MGMTP16455 207 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 WDR82Q6UXN9 313 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 CEP19Q96LK0 163 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 INHBBP09529 407 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 EVX1P49640 407 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 CCDC190Q86UF4 302 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 MFSD4AQ8N468 514 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms