RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SNX33Q8WV41 574 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 PTX4Q96A99 478 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 DNAJA3Q96EY1 480 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 TIMD4Q96H15 378 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 KCNJ15Q99712 375 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 ATF6BQ99941 703 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 NUDT16L1Q9BRJ7 211 aaKnown RBP5.51□□□□□ -1.53
CSTF3-201ENST00000323959 NEK6Q9HC98 313 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF391Q9UJN7 358 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 LAMP5Q9UJQ1 280 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 ADAM30Q9UKF2 790 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 ETV7Q9Y603 341 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 R4GMQ9 66 aa5.51□□□□□ -1.53
CSTF3-201ENST00000323959 CIB4A0PJX0 185 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 PRR32B1ATL7 298 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 SYNGR3O43761 229 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 APOC1P02654 83 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CST2P09228 141 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 UBCP0CG48 685 aaKnown RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CALCBP10092 127 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 COX5BP10606 129 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 NAT2P11245 290 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF43P17038 809 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 IGFBP3P17936 291 aaPredicted RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CELP19835 753 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 GRB2P62993 217 aaKnown RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 LCN2P80188 198 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 LINC00336Q6ZUF6 198 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 WDR31Q8NA23 367 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 PLPP7Q8NBV4 271 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 OR2G2Q8NGZ5 317 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 GRPEL2Q8TAA5 225 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 GIMAP1Q8WWP7 306 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 GHSRQ92847 366 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 NABP1Q96AH0 204 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 SLC25A36Q96CQ1 311 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 DERL3Q96Q80 235 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 OR5B2Q96R09 309 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 AIFM2Q9BRQ8 373 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 DPAGT1Q9H3H5 408 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 PNRC2Q9NPJ4 139 aaKnown RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 DIABLOQ9NR28 239 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 POLE4Q9NR33 117 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 TNFRSF19Q9NS68 423 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 GLTPQ9NZD2 209 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CMAHPQ9Y471 501 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 V9GYH0 126 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ZSCAN5BA6NJL1 495 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 E9PI62 339 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF593O00488 134 aaPredicted RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 TNFRSF13BO14836 293 aaPredicted RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 UPK1BO75841 260 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 HLA-DOBP13765 273 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 NR4A1P22736 598 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 MYL9P24844 172 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 SHC1P29353 583 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 SDC2P34741 201 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 BIDP55957 195 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ECH1Q13011 328 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 TMEM176BQ3YBM2 270 aaPredicted RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 TBRG1Q3YBR2 411 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 FAM27BQ5VT28 67 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 LRRN1Q6UXK5 716 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 LYPD6Q86Y78 171 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 C1orf174Q8IYL3 243 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 GPR137CQ8N3F9 429 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ASCC1Q8N9N2 400 aaKnown RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 C15orf40Q8WUR7 153 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 RGP1Q92546 391 aaPredicted RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 RAB1CQ92928 201 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 NELFAQ9H3P2 528 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 FRRS1LQ9P0K9 344 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 PRSS50Q9UI38 385 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 KLHDC2Q9Y2U9 406 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ADARB2-AS1A8MUL3 147 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 J3QLW9 94 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CXCL13O43927 109 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 SLC16A7O60669 478 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CDRT1O95170 752 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 PSKH1P11801 424 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF19P17023 458 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CTRB1P17538 263 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 PYCR1P32322 319 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 RIDAP52758 137 aaKnown RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 GABRA6Q16445 453 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ACSM3Q53FZ2 586 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 DDI2Q5TDH0 399 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 CTRB2Q6GPI1 263 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 C22orf42Q6IC83 251 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 IDO2Q6ZQW0 420 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 LRRC28Q86X40 367 aaPredicted RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 PRSS35Q8N3Z0 413 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 KLHDC1Q8N7A1 406 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 OR10S1Q8NGN2 331 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 DCLRE1CQ96SD1 692 aaKnown RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 ABHD6Q9BV23 337 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 MIXL1Q9H2W2 232 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 C1orf198Q9H425 327 aa5.5□□□□□ -1.53
CSTF3-201ENST00000323959 RANBP3Q9H6Z4 567 aaPredicted RBP5.5□□□□□ -1.53
CSTF3-201ENST00000323959 B3GAT2Q9NPZ5 323 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms