RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 RPS11P62280 158 aaKnown RBP eCLIP9.66□□□□□ -0.86
TOP3A-201ENST00000321105 GGTLC2Q14390 218 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 PLA1AQ53H76 456 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 DRAM2Q6UX65 266 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 WFDC8Q8IUA0 241 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 PP6455Q8WZ26 134 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 NMNAT2Q9BZQ4 307 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 TGIF2Q9GZN2 237 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 CHCHD2Q9Y6H1 151 aaPredicted RBP9.66□□□□□ -0.86
TOP3A-201ENST00000321105 GTF3C1Q12789 2109 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 ZNF816-ZNF321PA0A0X1KG74 233 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 VSTM5A8MXK1 200 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 GIPP09681 153 aaPredicted RBP9.66□□□□□ -0.86
TOP3A-201ENST00000321105 PGA4P0DJD7 388 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 PGA3P0DJD8 388 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 TLE1Q04724 770 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 CAMK2BQ13554 666 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 KLF9Q13886 244 aaPredicted RBP9.66□□□□□ -0.86
TOP3A-201ENST00000321105 SNAI3Q3KNW1 292 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 PPP1R32Q7Z5V6 425 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 STX12Q86Y82 276 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 ZDHHC23Q8IYP9 409 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 NECAP2Q9NVZ3 263 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 FREM1Q5H8C1 2179 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 DNAH14Q0VDD8 3507 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 HPP00738 406 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 C19orf48Q6RUI8 117 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 OR8U1Q8NH10 309 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 ZNF519Q8TB69 540 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 C1orf123Q9NWV4 160 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 GPR160Q9UJ42 338 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 CLDN16Q9Y5I7 305 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 EFNA2O43921 213 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 IFNA5P01569 189 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 RAB35Q15286 201 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 TMEM268Q5VZI3 342 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 CDH26Q8IXH8 852 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 ADPRHL1Q8NDY3 354 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 EXTL1Q92935 676 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 TTTY12Q9BZ98 90 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 PRMT8Q9NR22 394 aaPredicted RBP9.66□□□□□ -0.86
TOP3A-201ENST00000321105 KCNK7Q9Y2U2 307 aa9.66□□□□□ -0.86
TOP3A-201ENST00000321105 OR6C65A6NJZ3 312 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 DEFB108AA8MXU0 73 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 TXNDC12O95881 172 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 IFNA2P01563 188 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 PDGFAP04085 211 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 TUBG1P23258 451 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 PSMB6P28072 239 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 POC1BQ8TC44 478 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 DYNLRB1Q9NP97 96 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 FANCFQ9NPI8 374 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 LRP3O75074 770 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 EFNB1P98172 346 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 PSG4Q00888 419 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 PRDX4Q13162 271 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 OR8B8Q15620 311 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 ATPAF1Q5TC12 328 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-201ENST00000321105 SKA3Q8IX90 412 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 TCTE3Q8IZS6 198 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 GFOD1Q9NXC2 390 aa9.65□□□□□ -0.86
TOP3A-201ENST00000321105 A0A0G2JK05 382 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 HSPB2A8KAH6 182 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 SPRY3O43610 288 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 CRYZL1O95825 349 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 IFNA17P01571 189 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 TAGLNQ01995 201 aaKnown RBP9.65□□□□□ -0.87
TOP3A-201ENST00000321105 HSPB2Q16082 182 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 KRBOX4Q5JUW0 171 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 DCAF12L2Q5VW00 463 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 SEZ6L2Q6UXD5 910 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 ADAD2Q8NCV1 583 aaKnown RBP9.65□□□□□ -0.87
TOP3A-201ENST00000321105 NFAM1Q8NET5 270 aaPredicted RBP9.65□□□□□ -0.87
TOP3A-201ENST00000321105 FAM213BQ8TBF2 198 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 GPR35Q9HC97 309 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 MSL2Q9HCI7 577 aa9.65□□□□□ -0.87
TOP3A-201ENST00000321105 A0A0B4J293 547 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 SELEP16581 610 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 GSK3AP49840 483 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 SUCLG1P53597 346 aaKnown RBP9.64□□□□□ -0.87
TOP3A-201ENST00000321105 LIMK1P53667 647 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF92Q03936 586 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 EIF3IQ13347 325 aaKnown RBP9.64□□□□□ -0.87
TOP3A-201ENST00000321105 STPG1Q5TH74 334 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 OR8G2PQ6IF36 304 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 TFAP2EQ6VUC0 442 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF709Q8N972 641 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 SLC30A7Q8NEW0 376 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF285Q96NJ3 590 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 TINAGQ9UJW2 476 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 CST7O76096 145 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 FTH1P19P0C7X4 201 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF133P52736 654 aaPredicted RBP9.64□□□□□ -0.87
TOP3A-201ENST00000321105 TEX261Q6UWH6 196 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 LYG2Q86SG7 212 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 SLC51BQ86UW2 128 aa9.64□□□□□ -0.87
TOP3A-201ENST00000321105 OR10J5Q8NHC4 309 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms