RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 IGLV3-1P01715 115 aa15.19■□□□□ 0.02
COL9A1-201ENST00000320755 ZNF32P17041 273 aa15.19■□□□□ 0.02
COL9A1-201ENST00000320755 FOLR3P41439 243 aa15.19■□□□□ 0.02
COL9A1-201ENST00000320755 GUCA2BQ16661 112 aa15.19■□□□□ 0.02
COL9A1-201ENST00000320755 CLEC9AQ6UXN8 241 aa15.19■□□□□ 0.02
COL9A1-201ENST00000320755 EMG1Q92979 244 aaKnown RBP15.19■□□□□ 0.02
COL9A1-201ENST00000320755 FOXD3Q9UJU5 478 aaPredicted RBP15.19■□□□□ 0.02
COL9A1-201ENST00000320755 ABCD4O14678 606 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 AGPAT2O15120 278 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 FBXO24O75426 580 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 RPS2P15880 293 aaKnown RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 RCC1P18754 421 aaPredicted RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 HTR5AP47898 357 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 WIPI1Q5MNZ9 446 aaPredicted RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 FAM27BQ5VT28 67 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 IGKV1-27A0A075B6S5 117 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 FOXI3A8MTJ6 420 aaPredicted RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 TOR1AO14656 332 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 IFNA2P01563 188 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 P04436 131 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 RGS19P49795 217 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 MLF1P58340 268 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 C9orf135Q5VTT2 229 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 RPL7L1Q6DKI1 246 aaKnown RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 RNF141Q8WVD5 230 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 FAM96BQ9Y3D0 163 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 LSM5Q9Y4Y9 91 aaKnown RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 PCDHGA1Q9Y5H4 931 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 TRBV6-7A0A0A0MS04 114 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 CEACAM18A8MTB9 384 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 F8VVB4 439 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 F8VWA3 439 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 OR5H8P0DN80 308 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 OTX1P32242 354 aaPredicted RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 RFC3P40938 356 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 PIGYQ3MUY2 71 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 TSPO2Q5TGU0 170 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 OR2A2Q6IF42 318 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 RPUSD3Q6P087 351 aaKnown RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 AAED1Q7RTV5 226 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 PARP12Q9H0J9 701 aaKnown RBP15.18■□□□□ 0.02
COL9A1-201ENST00000320755 METTL9Q9H1A3 318 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 AK3Q9UIJ7 227 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 DNAJC13O75165 2243 aa15.18■□□□□ 0.02
COL9A1-201ENST00000320755 TMEM218A2RU14 115 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 FIGNL2A6NMB9 653 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 F8W036 122 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 BLOC1S1P78537 153 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 GPR137CQ8N3F9 429 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 SLC30A7Q8NEW0 376 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 FGFBP3Q8TAT2 258 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 M1APQ8TC57 530 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 BORCS8Q96FH0 119 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 CMSS1Q9BQ75 279 aaKnown RBP15.17■□□□□ 0.02
COL9A1-201ENST00000320755 NME2P22392 152 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 SUCLG1P53597 346 aaKnown RBP15.17■□□□□ 0.02
COL9A1-201ENST00000320755 MRPS34P82930 218 aaKnown RBP15.17■□□□□ 0.02
COL9A1-201ENST00000320755 RBM39Q14498 530 aaKnown RBP15.17■□□□□ 0.02
COL9A1-201ENST00000320755 TRIM61Q5EBN2 209 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 CDCP2Q5VXM1 449 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 SGPP2Q8IWX5 399 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 POC1AQ8NBT0 407 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 OR1F12Q8NHA8 337 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 Q96M66 194 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 LIME1Q9H400 295 aa15.17■□□□□ 0.02
COL9A1-201ENST00000320755 PMS2P1A4D2B8 440 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 GEMIN2O14893 280 aaKnown RBP15.16■□□□□ 0.02
COL9A1-201ENST00000320755 LRP3O75074 770 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 ATG12O94817 140 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 APOC1P02654 83 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 ALDH3B1P43353 468 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 CEACAM16Q2WEN9 425 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 PDSS1Q5T2R2 415 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 SLC16A14Q7RTX9 510 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 ARL11Q969Q4 196 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 MSTNO14793 375 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 RAC3P60763 192 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 PHLDA2Q53GA4 152 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 PUSL1Q8N0Z8 303 aaKnown RBP15.16■□□□□ 0.02
COL9A1-201ENST00000320755 STOML3Q8TAV4 291 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 PIGCQ92535 297 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 MRPL24Q96A35 216 aaKnown RBP15.16■□□□□ 0.02
COL9A1-201ENST00000320755 SULT4A1Q9BR01 284 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 TM2D1Q9BX74 207 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 ANXA10Q9UJ72 324 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 PADI1Q9ULC6 663 aa15.16■□□□□ 0.02
COL9A1-201ENST00000320755 ADCYAP1P18509 176 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 CCNOP22674 350 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 HIST1H3AP68431 136 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 HIST2H3PS2Q5TEC6 136 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 HIST2H3AQ71DI3 136 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 FBXL14Q8N1E6 418 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 FNDC9Q8TBE3 224 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 ZNF845Q96IR2 970 aaPredicted RBP15.15■□□□□ 0.02
COL9A1-201ENST00000320755 ZNF407Q9C0G0 2248 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 FGF16O43320 207 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 SYNGR3O43761 229 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 TCN2P20062 427 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 SRYQ05066 204 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 ESX1Q8N693 406 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms