RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 MRPL3P09001 348 aaKnown RBP16.35■□□□□ 0.21
SERF1A-201ENST00000317633 T-ENOLP0DO92 83 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 FAHP16930 419 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 PRKACGP22612 351 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 LGALS4P56470 323 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 ACTR3P61158 418 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 DMRTC1Q5HYR2 192 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 LIAT1Q6ZQX7 453 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 C1QL4Q86Z23 238 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 MKXQ8IYA7 352 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 HS3ST5Q8IZT8 346 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 C17orf50Q8WW18 174 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 RORBQ92753 470 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 OR8B4Q96RC9 309 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 TVP23BQ9NYZ1 205 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 USE1Q9NZ43 259 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 IKZF2Q9UKS7 526 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 POLDIP2Q9Y2S7 368 aa16.35■□□□□ 0.21
SERF1A-201ENST00000317633 PGA5P0DJD9 388 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 PRDX2P32119 198 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 HAAOP46952 286 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 EFNB2P52799 333 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 PPP1R35Q8TAP8 253 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 PRRG3Q9BZD7 231 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 NPFFR1Q9GZQ6 430 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 MOB1AQ9H8S9 216 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 DNAJB9Q9UBS3 223 aa16.34■□□□□ 0.21
SERF1A-201ENST00000317633 PRKDCP78527 4128 aaKnown RBP16.34■□□□□ 0.21
SERF1A-201ENST00000317633 J3QT63 122 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 NOS1APO75052 506 aaPredicted RBP16.33■□□□□ 0.2
SERF1A-201ENST00000317633 CRISP1P54107 249 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 ERVFRD-1P60508 538 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 CBX1P83916 185 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 CLVS2Q5SYC1 327 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 TMEM200BQ69YZ2 307 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 SPATA24Q86W54 205 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 CD177Q8N6Q3 437 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 OR2T27Q8NH04 317 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 AJUBAQ96IF1 538 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 CNN2Q99439 309 aaKnown RBP16.33■□□□□ 0.2
SERF1A-201ENST00000317633 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.33■□□□□ 0.2
SERF1A-201ENST00000317633 GTF2A1LQ9UNN4 478 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 SIGLEC9Q9Y336 463 aa16.33■□□□□ 0.2
SERF1A-201ENST00000317633 CCDC182A6NF36 153 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 LOC110117498-PIK3R3F6TDL0 507 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 DLGAP1O14490 977 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 PLXNB1O43157 2135 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 NXPH2O95156 264 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 FAM107AO95990 144 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 ESRRGP62508 458 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 FLOT2Q14254 428 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 CALHM1Q8IU99 346 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 KLHDC1Q8N7A1 406 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 NRBF2Q96F24 287 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 ZNF488Q96MN9 340 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 MNTQ99583 582 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 TTTY10Q9BZA0 68 aa16.32■□□□□ 0.2
SERF1A-201ENST00000317633 PAPOLBQ9NRJ5 636 aaKnown RBP16.32■□□□□ 0.2
SERF1A-201ENST00000317633 H2AFY2Q9P0M6 372 aaPredicted RBP16.32■□□□□ 0.2
SERF1A-201ENST00000317633 SYNGR1O43759 233 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 FKBP6O75344 327 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 TTRP02766 147 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 BCL2L15Q5TBC7 163 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 TMEM42Q69YG0 159 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 CRIP3Q6Q6R5 217 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 ZNF322Q6U7Q0 402 aaPredicted RBP16.31■□□□□ 0.2
SERF1A-201ENST00000317633 OR4M1Q8NGD0 313 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 PPP1R14AQ96A00 147 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 GPR173Q9NS66 373 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 OR14J1Q9UGF5 321 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 COPS3Q9UNS2 423 aa16.31■□□□□ 0.2
SERF1A-201ENST00000317633 DHRS7CA6NNS2 312 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 PRR32B1ATL7 298 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 OPN1MWP04001 364 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 TK1P04183 234 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 OPN1MW2P0DN77 364 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 OPN1MW3P0DN78 364 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 COX7A1P24310 79 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 CXCR4P61073 352 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 MFGE8Q08431 387 aaPredicted RBP16.3■□□□□ 0.2
SERF1A-201ENST00000317633 PTGES3Q15185 160 aaKnown RBP16.3■□□□□ 0.2
SERF1A-201ENST00000317633 ASRGL1Q7L266 308 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 ELMOD2Q8IZ81 293 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 C11orf42Q8N5U0 333 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 CFHR4Q92496 578 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 NRIP2Q9BQI9 281 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 FOXJ3Q9UPW0 622 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 SNX5Q9Y5X3 404 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 R4GMQ9 66 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 V9GYS6 101 aa16.3■□□□□ 0.2
SERF1A-201ENST00000317633 PQLC2LA1A4F0 135 aa16.29■□□□□ 0.2
SERF1A-201ENST00000317633 VSIG10L2P0DP72 767 aa16.29■□□□□ 0.2
SERF1A-201ENST00000317633 CCL3L1P16619 93 aa16.29■□□□□ 0.2
SERF1A-201ENST00000317633 MPZP25189 248 aa16.29■□□□□ 0.2
SERF1A-201ENST00000317633 CEBPDP49716 269 aaPredicted RBP16.29■□□□□ 0.2
SERF1A-201ENST00000317633 BMXP51813 675 aa16.29■□□□□ 0.2
SERF1A-201ENST00000317633 MEPCEQ7L2J0 689 aaKnown RBP16.29■□□□□ 0.2
SERF1A-201ENST00000317633 C11orf44Q8N8P7 122 aa16.29■□□□□ 0.2
SERF1A-201ENST00000317633 CDCA4Q9BXL8 241 aa16.29■□□□□ 0.2
SERF1A-201ENST00000317633 HES4Q9HCC6 221 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms