RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 OR6N2Q8NGY6 317 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 NKD1Q969G9 470 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MOB3AQ96BX8 217 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 FOXN4Q96NZ1 517 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF385AQ96PM9 386 aaKnown RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 VRK1Q99986 396 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 SLC6A15Q9H2J7 730 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 PRR13Q9NZ81 148 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 A0A0G2JRQ6 117 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MEIS3P1A6NDR6 274 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 HSD17B6O14756 317 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 GNB5O14775 395 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 STK17BO94768 372 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 PTBP3O95758 552 aaKnown RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 CTSDP07339 412 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ANXA2P07355 339 aaKnown RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MSX1P28360 303 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MRPS34P82930 218 aaKnown RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 GLO1Q04760 184 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 C17orf67Q0P5P2 114 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 BTN1A1Q13410 526 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 GPR137CQ8N3F9 429 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 OR10G8Q8NGN5 311 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 FGGYQ96C11 551 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MMABQ96EY8 250 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 NKX6-2Q9C056 277 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 WNT5BQ9H1J7 359 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 PTRH2Q9Y3E5 179 aaKnown RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 RFNGQ9Y644 331 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 LRBAP50851 2863 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 SPAARA0A1B0GVQ0 90 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 CDC14CA4D256 554 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 MEGF11A6BM72 1044 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 HEXBP07686 556 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 CELA2AP08217 269 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 CDAP32320 146 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 LHX2P50458 406 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 PDLIM4P50479 330 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 Q6P435 159 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 TIPARPQ7Z3E1 657 aaKnown RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 OR5T2Q8NGG2 359 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 OR6K6Q8NGW6 343 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 OR10G6Q8NH81 332 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 MARCH1Q8TCQ1 289 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 DAZLQ92904 295 aaKnown RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 LRRC46Q96FV0 321 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 CCDC74BQ96LY2 380 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 OXGR1Q96P68 337 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 IFT46Q9NQC8 304 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 FOXJ2Q9P0K8 574 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 GPN3Q9UHW5 284 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 HS3ST3B1Q9Y662 390 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 FREM1Q5H8C1 2179 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 ALPK2Q86TB3 2170 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 CCSO14618 274 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 YPEL1O60688 119 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 FCN3O75636 299 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 RP2O75695 350 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 DHRS3O75911 302 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 CHRM2P08172 466 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 SOX2P48431 317 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 ADAM8P78325 824 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 C1orf61Q13536 156 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 SGCAQ16586 387 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 DNLZQ5SXM8 178 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 POMZP3Q6PJE2 187 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 HEPN1Q6WQI6 88 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF546Q86UE3 836 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 FAM90A1Q86YD7 464 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 LINC00346Q8IVM7 164 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 KDM8Q8N371 416 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 BPIFB2Q8N4F0 458 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 STT3BQ8TCJ2 826 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 HIST1H2BAQ96A08 127 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 YPEL2Q96QA6 119 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 MFFQ9GZY8 342 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 DCDC2BA2VCK2 349 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 C21orf140B9A014 251 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF878C9JN71 531 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 I3L521 148 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 RAB3DO95716 219 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 F12P00748 615 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 PGCP20142 388 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 NUP62P37198 522 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 LUMP51884 338 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 RND2P52198 227 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 HAGHQ16775 308 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF704Q6ZNC4 412 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 TRAPPC6BQ86SZ2 158 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 C11orf53Q8IXP5 236 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 OR10AD1Q8NGE0 317 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 OR10K1Q8NGX5 313 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 RXFP4Q8TDU9 374 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 SMAD5Q99717 465 aaKnown RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 PRRT1Q99946 306 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 SULT4A1Q9BR01 284 aa6.69□□□□□ -1.34
CNOT4-201ENST00000315544 H2AFY2Q9P0M6 372 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-201ENST00000315544 CLEC4AQ9UMR7 237 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms