RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 CHRNA7P36544 502 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 LBX1P52954 281 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 TCTAP57738 103 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 LCN10Q6JVE6 187 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 DMBX1Q8NFW5 382 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 OR1L6Q8NGR2 347 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM147Q9BVK8 224 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 PMCHP20382 165 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 RAE1P78406 368 aaKnown RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 RBMXL3Q8N7X1 1067 aaKnown RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF2Q9BSG1 426 aaPredicted RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 METTL1Q9UBP6 276 aaKnown RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 VAX2Q9UIW0 290 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 SLCO1B1Q9Y6L6 691 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 TRBV23OR9-2A0A075B6M9 112 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 IGHMP01871 453 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 HLA-GP17693 338 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 GUCA2BQ16661 112 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 RPL7L1Q6DKI1 246 aaKnown RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 ASCL5Q7RTU5 278 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 NKAIN4Q8IVV8 208 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 BPIFCQ8NFQ6 507 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 THYN1Q9P016 225 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 GALR2O43603 387 aaPredicted RBP7.9□□□□□ -1.15
COL6A5-202ENST00000312481 HOXD4P09016 255 aaPredicted RBP7.9□□□□□ -1.15
COL6A5-202ENST00000312481 TNFRSF1AP19438 455 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 CDKN2AP42771 156 aaKnown RBP7.9□□□□□ -1.15
COL6A5-202ENST00000312481 RIPPLY2Q5TAB7 128 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 TAAR3PQ9P1P4 343 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.15
COL6A5-202ENST00000312481 TNCP24821 2201 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM235A6NFC5 223 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 OR2A4O95047 310 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 GPANK1O95872 356 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 LIMS1P48059 325 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 CEBPEQ15744 281 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 PRICKLE4Q2TBC4 344 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 CARD17Q5XLA6 110 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 NLGN4XQ8N0W4 816 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 NLGN4YQ8NFZ3 816 aaPredicted RBP7.9□□□□□ -1.15
COL6A5-202ENST00000312481 OR4D9Q8NGE8 314 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 CNRIP1Q96F85 164 aaPredicted RBP7.9□□□□□ -1.15
COL6A5-202ENST00000312481 PERPQ96FX8 193 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 OR2A7Q96R45 310 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 OR6C3Q9NZP0 311 aa7.9□□□□□ -1.15
COL6A5-202ENST00000312481 CNN1P51911 297 aaKnown RBP7.89□□□□□ -1.15
COL6A5-202ENST00000312481 UBE2IP63279 158 aaKnown RBP7.89□□□□□ -1.15
COL6A5-202ENST00000312481 LRRC18Q8N456 261 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 OR2D3Q8NGH3 330 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 SARAFQ96BY9 339 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 REEP6Q96HR9 211 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 M0R296 226 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 MPPED1O15442 326 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 SLURP2P0DP57 97 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 CLDN17P56750 224 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 MOB3CQ70IA8 216 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 OR2I1PQ8NGU4 316 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 PIGCQ92535 297 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 WBP1LQ9NX94 342 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 HTRA3P83110 453 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM71Q6P5X7 295 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 CORO6Q6QEF8 472 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 SIRT6Q8N6T7 355 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM99Q8N816 258 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 NPDC1Q9NQX5 325 aaPredicted RBP7.89□□□□□ -1.15
COL6A5-202ENST00000312481 NEU3Q9UQ49 428 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 C2orf16Q68DN1 1984 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 NBASA2RRP1 2371 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 KRASP01116 189 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 RAC3P60763 192 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF117Q03924 483 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 COL19A1Q14993 1142 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 TMED6Q8WW62 240 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 TAAR9Q96RI9 348 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 GPR87Q9BY21 358 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 TIMM9Q9Y5J7 89 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 CD79AP11912 226 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 SMAD4Q13485 552 aaKnown RBP7.89□□□□□ -1.15
COL6A5-202ENST00000312481 OR2A5Q96R48 311 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 MED20Q9H944 212 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 HSPB8Q9UJY1 196 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 LSM2Q9Y333 95 aaKnown RBP7.89□□□□□ -1.15
COL6A5-202ENST00000312481 SRFP11831 508 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 ARG2P78540 354 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 SLC10A1Q14973 349 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 FCRLBQ6BAA4 426 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 OR2C3Q8N628 320 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 ZG16BQ96DA0 208 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 CACNG4Q9UBN1 327 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 FBLN5Q9UBX5 448 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 MYADML2A6NDP7 307 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 EPPINO95925 133 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 HSPB1P04792 205 aaKnown RBP7.89□□□□□ -1.15
COL6A5-202ENST00000312481 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 TIMD4Q96H15 378 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 PSMG3Q9BT73 122 aaPredicted RBP7.89□□□□□ -1.15
COL6A5-202ENST00000312481 BANF2Q9H503 90 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 LRP12Q9Y561 859 aa7.89□□□□□ -1.15
COL6A5-202ENST00000312481 ELOBQ15370 118 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms