RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 TAAR9Q96RI9 348 aa17.21■□□□□ 0.35
LRFN4-201ENST00000309602 METTL9Q9H1A3 318 aa17.21■□□□□ 0.35
LRFN4-201ENST00000309602 MRPS18CQ9Y3D5 142 aaKnown RBP17.21■□□□□ 0.35
LRFN4-201ENST00000309602 TIMM10BQ9Y5J6 103 aa17.21■□□□□ 0.35
LRFN4-201ENST00000309602 TRBV6-7A0A0A0MS04 114 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 F5H0A9 414 aaPredicted RBP17.2■□□□□ 0.34
LRFN4-201ENST00000309602 PGAM2P15259 253 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 PPA1Q15181 289 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 SKA3Q8IX90 412 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 EIF4E3Q8N5X7 224 aaKnown RBP17.2■□□□□ 0.34
LRFN4-201ENST00000309602 THOC3Q96J01 351 aaKnown RBP17.2■□□□□ 0.34
LRFN4-201ENST00000309602 BARX1Q9HBU1 254 aaPredicted RBP17.2■□□□□ 0.34
LRFN4-201ENST00000309602 KRBOX1C9JBD0 128 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 CYTIPO60759 359 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 CNR1P21554 472 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 CYCSP99999 105 aaKnown RBP17.2■□□□□ 0.34
LRFN4-201ENST00000309602 RSU1Q15404 277 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 CNN3Q15417 329 aaKnown RBP17.2■□□□□ 0.34
LRFN4-201ENST00000309602 TAF9Q16594 264 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 RIPPLY2Q5TAB7 128 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 RTL6Q6ICC9 239 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 PLXDC2Q6UX71 529 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 ZSCAN4Q8NAM6 433 aaPredicted RBP17.2■□□□□ 0.34
LRFN4-201ENST00000309602 BHLHE23Q8NDY6 225 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 SPRY4Q9C004 299 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 STRADBQ9C0K7 418 aa17.2■□□□□ 0.34
LRFN4-201ENST00000309602 C9orf172C9J069 976 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 HOXD4P09016 255 aaPredicted RBP17.19■□□□□ 0.34
LRFN4-201ENST00000309602 MPLP40238 635 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 RPUSD3Q6P087 351 aaKnown RBP17.19■□□□□ 0.34
LRFN4-201ENST00000309602 UNQ6126/PRO20091Q6UXV3 157 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 STPG2Q8N412 459 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 RRNAD1Q96FB5 475 aaKnown RBP17.19■□□□□ 0.34
LRFN4-201ENST00000309602 PHYHIPLQ96FC7 376 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 ZPBPQ9BS86 351 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 ARRDC1-AS1Q9H2J1 176 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 LRFN1Q9P244 771 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 CSTBP04080 98 aaKnown RBP17.19■□□□□ 0.34
LRFN4-201ENST00000309602 JMJD7P0C870 316 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 TMEM42Q69YG0 159 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 CPNE4Q96A23 557 aaPredicted RBP17.19■□□□□ 0.34
LRFN4-201ENST00000309602 OR10C1Q96KK4 312 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 FAAP24Q9BTP7 215 aa17.19■□□□□ 0.34
LRFN4-201ENST00000309602 IGHV3-9P01782 118 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 RFC3P40938 356 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 RBP2P50120 134 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 SNTB1Q13884 538 aaKnown RBP17.18■□□□□ 0.34
LRFN4-201ENST00000309602 NSUN5P2Q63ZY6 315 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 MRPS24Q96EL2 167 aaKnown RBP17.18■□□□□ 0.34
LRFN4-201ENST00000309602 BORCS8Q96FH0 119 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 CDK2AP1O14519 115 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 KNG1P01042 644 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 NRASP01111 189 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 ZNF883P0CG24 379 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 FAM3AP98173 230 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 ZNF92Q03936 586 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 SURF2Q15527 256 aaPredicted RBP17.18■□□□□ 0.34
LRFN4-201ENST00000309602 SHARPINQ9H0F6 387 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 FOXJ2Q9P0K8 574 aa17.18■□□□□ 0.34
LRFN4-201ENST00000309602 IGKV1-12A0A0C4DH73 117 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 TEX13DA0A0J9YY54 714 aaPredicted RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 hCG_38984A0A1B0GV85 526 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 RRP8O43159 456 aaKnown RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 IGKV1D-12P01611 117 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 PTGER4P35408 488 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 LHFPL2Q6ZUX7 228 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 FAM219AQ8IW50 185 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 NAXEQ8NCW5 288 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 PIK3IP1Q96FE7 263 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 ZNF2Q9BSG1 426 aaPredicted RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 MS4A7Q9GZW8 240 aaPredicted RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 METTL8Q9H825 291 aaKnown RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 AK3Q9UIJ7 227 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 BOKQ9UMX3 212 aaPredicted RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 A0A1B0GW55 424 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 A0A1W2PNU3 283 aaPredicted RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DUX4L2P0CJ85 424 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DUX4L3P0CJ86 424 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DUX4L4P0CJ87 422 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DUX4L5P0CJ88 424 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DUX4L6P0CJ89 424 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DUX4L7P0CJ90 424 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 PCBD1P61457 104 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 PPIAP62937 165 aaKnown RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 PAN3Q58A45 887 aaKnown RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 ELP2Q6IA86 826 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 ASCL4Q6XD76 172 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 CPNE2Q96FN4 548 aaPredicted RBP17.17■□□□□ 0.34
LRFN4-201ENST00000309602 SIGLEC12Q96PQ1 595 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DDA1Q9BW61 102 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 OR5AC2Q9NZP5 309 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 DUX4Q9UBX2 424 aa17.17■□□□□ 0.34
LRFN4-201ENST00000309602 NEURL1O76050 574 aa17.16■□□□□ 0.34
LRFN4-201ENST00000309602 CELA3AP09093 270 aa17.16■□□□□ 0.34
LRFN4-201ENST00000309602 MMP7P09237 267 aaPredicted RBP17.16■□□□□ 0.34
LRFN4-201ENST00000309602 RRADP55042 308 aa17.16■□□□□ 0.34
LRFN4-201ENST00000309602 TSPO2Q5TGU0 170 aa17.16■□□□□ 0.34
LRFN4-201ENST00000309602 HES7Q9BYE0 225 aa17.16■□□□□ 0.34
LRFN4-201ENST00000309602 ANXA10Q9UJ72 324 aa17.16■□□□□ 0.34
LRFN4-201ENST00000309602 C14orf166Q9Y224 244 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms