RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ARIH2OSQ8N7S6 290 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 SSMEM1Q8WWF3 244 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 SOSTQ9BQB4 213 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 RTN4RQ9BZR6 473 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 NGBQ9NPG2 151 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 HTR1DP28221 377 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 ELAVL1Q15717 326 aaKnown RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 OR1L6Q8NGR2 347 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 UBTD2Q8WUN7 234 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 SCMH1Q96GD3 660 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 GABARAPL3Q9BY60 117 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 ZNF576Q9H609 170 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 KIR3DX1Q9H7L2 352 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 CXCL3P19876 107 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 CEACAM16Q2WEN9 425 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 NTNG2Q96CW9 530 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 FER1L6-AS2Q96M78 137 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
USP38-201ENST00000307017 MASP2O00187 686 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 SBK3P0C264 359 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 ZP3P21754 424 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 CD96P40200 585 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 WDR38Q5JTN6 314 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 CHCHD4Q8N4Q1 142 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 EXD3Q8N9H8 876 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 LINC01553A4QN01 128 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 CCR2P41597 374 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 GNG4P50150 75 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 CNN1P51911 297 aaKnown RBP11.31□□□□□ -0.6
USP38-201ENST00000307017 TAS2R45P59539 299 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 CCDC190Q86UF4 302 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 HDAC8Q9BY41 377 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 SCN11AQ9UI33 1791 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 NUP214P35658 2090 aaPredicted RBP11.31□□□□□ -0.6
USP38-201ENST00000307017 TMEM129A0AVI4 362 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 ATF1P18846 271 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 BSGP35613 385 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 TOMM34Q15785 309 aaPredicted RBP11.31□□□□□ -0.6
USP38-201ENST00000307017 FNDC7Q5VTL7 733 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 GPX8Q8TED1 209 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 NEURL2Q9BR09 285 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 PROCRQ9UNN8 238 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 AUP1Q9Y679 476 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 A0A087X0M5 115 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 A0A1B0GX30 115 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 PNLIPP16233 465 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 LPAR6P43657 344 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 TMEM178AQ8NBL3 297 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 EXTL1Q92935 676 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 HGDQ93099 445 aa11.31□□□□□ -0.6
USP38-201ENST00000307017 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
USP38-201ENST00000307017 C1QCP02747 245 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 GZMKP49863 264 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 POLR2GP62487 172 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP38-201ENST00000307017 DUSP8Q13202 625 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 RPEL1Q2QD12 228 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 C17orf47Q8NEP4 570 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 VN1R2Q8NFZ6 395 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 MMACHCQ9Y4U1 282 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
USP38-201ENST00000307017 C9orf170A2RU37 121 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 SLC22A20A6NK97 555 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 CD81P60033 236 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 RAE1P78406 368 aaKnown RBP11.3□□□□□ -0.6
USP38-201ENST00000307017 PJVKQ0ZLH3 352 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 FOXC1Q12948 553 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 ZNF141Q15928 474 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 ERASQ7Z444 233 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 HSD17B7P56937 341 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 BPIFB3P59826 476 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 GABRA6Q16445 453 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 DPPA3Q6W0C5 159 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 Q6ZS52 159 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 FUT9Q9Y231 359 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 HPXP02790 462 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 RCC1P18754 421 aaPredicted RBP11.3□□□□□ -0.6
USP38-201ENST00000307017 DIO1P49895 249 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 TTC9Q92623 222 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 TAAR6Q96RI8 345 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 ST8SIA5O15466 376 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 RGS7BPQ6MZT1 257 aaPredicted RBP11.3□□□□□ -0.6
USP38-201ENST00000307017 M1APQ8TC57 530 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
USP38-201ENST00000307017 ZNF250P15622 560 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 ETV6P41212 452 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 ECI1P42126 302 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 SHHQ15465 462 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 PHYHIPLQ96FC7 376 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 HES4Q9HCC6 221 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms