RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DMKNQ6E0U4 476 aaPredicted RBP14.18□□□□□ -0.14
USP42-201ENST00000306177 OR13G1Q8NGZ3 307 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 GPR87Q9BY21 358 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 RBM38Q9H0Z9 239 aaKnown RBP14.18□□□□□ -0.14
USP42-201ENST00000306177 MRM2Q9UI43 246 aaKnown RBP14.18□□□□□ -0.14
USP42-201ENST00000306177 MPZL1O95297 269 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 NGFP01138 241 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 METTL15P1P0C7V9 234 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 CMBLQ96DG6 245 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 TAAR3PQ9P1P4 343 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 TCFL5Q9UL49 500 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 A0A1W2PR80 420 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 OR7C2O60412 319 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 CDC14BO60729 498 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 ZNF83P51522 516 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 SLC37A1P57057 533 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 MICBQ29980 383 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 CD96P40200 585 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 TIGITQ495A1 244 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 MESTQ5EB52 335 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 PXDC1Q5TGL8 231 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 SLC36A1Q7Z2H8 476 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 NUFIP2Q7Z417 695 aaKnown RBP14.17□□□□□ -0.14
USP42-201ENST00000306177 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.17□□□□□ -0.14
USP42-201ENST00000306177 C17orf78Q8N4C9 275 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 UBAC2Q8NBM4 344 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 OR8U1Q8NH10 309 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 SPAG17Q6Q759 2223 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 SLC25A6P12236 298 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 OR3A4PP47883 348 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 PDCD1Q15116 288 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 NMES1Q9C002 83 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 FAM117AQ9C073 453 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 ZNF230Q9UIE0 474 aaPredicted RBP14.17□□□□□ -0.14
USP42-201ENST00000306177 OR2M5A3KFT3 312 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 RRASP10301 218 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 MDH2P40926 338 aaKnown RBP14.17□□□□□ -0.14
USP42-201ENST00000306177 CNTD2Q9H8S5 307 aa14.17□□□□□ -0.14
USP42-201ENST00000306177 LIPT2A6NK58 231 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 SF3B5Q9BWJ5 86 aaKnown RBP14.16□□□□□ -0.14
USP42-201ENST00000306177 TMED3Q9Y3Q3 217 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 GREM1O60565 184 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 PDGFBP01127 241 aaPredicted RBP14.16□□□□□ -0.14
USP42-201ENST00000306177 ENDOGQ14249 297 aaKnown RBP14.16□□□□□ -0.14
USP42-201ENST00000306177 C20orf196Q8IYI0 205 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 FAAP24Q9BTP7 215 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 DUSP15Q9H1R2 295 aaPredicted RBP14.16□□□□□ -0.14
USP42-201ENST00000306177 PLSCR3Q9NRY6 295 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 BTNL8Q6UX41 500 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 MRGPREQ86SM8 312 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 BPIFCQ8NFQ6 507 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 PTPMT1Q8WUK0 201 aaPredicted RBP14.16□□□□□ -0.14
USP42-201ENST00000306177 RPUSD4Q96CM3 377 aaKnown RBP14.16□□□□□ -0.14
USP42-201ENST00000306177 ADGRG7Q96K78 797 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 PRRX2Q99811 253 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 RAB18Q9NP72 206 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 ICAM5Q9UMF0 924 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 ZNF638Q14966 1978 aaKnown RBP14.16□□□□□ -0.14
USP42-201ENST00000306177 SPINK14Q6IE38 97 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 C6orf201Q7Z4U5 140 aa14.16□□□□□ -0.14
USP42-201ENST00000306177 H3BP45 60 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 M0R1X1 148 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 PDCD6O75340 191 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 IGHV4-34P06331 123 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 FGF7P21781 194 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 DEFA6Q01524 100 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 SIGLEC14Q08ET2 396 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 ETFDHQ16134 617 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 SP6Q3SY56 376 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 NPEPL1Q8NDH3 523 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 RXFP4Q8TDU9 374 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 POM121L2Q96KW2 1035 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 KIF13BQ9NQT8 1826 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 HRKO00198 91 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 OGG1O15527 345 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 SFT2D2O95562 160 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 SEMG1P04279 462 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 LIMK1P53667 647 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 TEX261Q6UWH6 196 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 OR10V1Q8NGI7 309 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 MYOZ1Q9NP98 299 aaPredicted RBP14.15□□□□□ -0.14
USP42-201ENST00000306177 U3KQ87 197 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 M0R296 226 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 ACSM4P0C7M7 580 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 CCL4P13236 92 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 PEBP1P30086 187 aaKnown RBP14.15□□□□□ -0.14
USP42-201ENST00000306177 CEACAM6P40199 344 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 ZNF90Q03938 601 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 ST3GAL2Q16842 350 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 C1QL3Q5VWW1 255 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 FAM96BQ9Y3D0 163 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 TCRBV16S1A1N1A0A5B0 115 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 IGHA1P01876 353 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 DHRS2Q13268 280 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 SKP2Q13309 424 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 ZBTB37Q5TC79 503 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 B3GNTL1Q67FW5 361 aaPredicted RBP14.15□□□□□ -0.14
USP42-201ENST00000306177 SMIM7Q9BQ49 75 aa14.15□□□□□ -0.14
USP42-201ENST00000306177 LSM6P62312 80 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms