RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 APC2O95996 2303 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 FRG2CA6NGY1 282 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 C9JQL5 133 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 HSPA12AO43301 675 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 SCGNO76038 276 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 SLC2A5P22732 501 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 ZNF41P51814 821 aaPredicted RBP9.66□□□□□ -0.86
LSM3-201ENST00000306024 SLC35D3Q5M8T2 416 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 GFI1BQ5VTD9 330 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 MARCH3Q86UD3 253 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 COMMD1Q8N668 190 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 OR10AD1Q8NGE0 317 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 RAB24Q969Q5 203 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 OPN3Q9H1Y3 402 aaPredicted RBP9.66□□□□□ -0.86
LSM3-201ENST00000306024 MRPL22Q9NWU5 206 aaKnown RBP9.66□□□□□ -0.86
LSM3-201ENST00000306024 TAS2R4Q9NYW5 299 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 DNAJB11Q9UBS4 358 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 VDAC3Q9Y277 283 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 SPTBN5Q9NRC6 3674 aaKnown RBP9.66□□□□□ -0.86
LSM3-201ENST00000306024 C11orf98E9PRG8 122 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 G3V3Y1 287 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 KLF4O43474 513 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 P04436 131 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 RPS2P15880 293 aaKnown RBP9.65□□□□□ -0.86
LSM3-201ENST00000306024 TMEM128Q5BJH2 165 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 ZNF343Q6P1L6 599 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 COX15Q7KZN9 410 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 ZAR1Q86SH2 424 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 TMEM234Q8WY98 164 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 CTHRC1Q96CG8 243 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 C5orf34Q96MH7 638 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 ST6GALNAC5Q9BVH7 336 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 NMES1Q9C002 83 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 WDR54Q9H977 334 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 TMEM100Q9NV29 134 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 FRRS1LQ9P0K9 344 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 GEMIN2O14893 280 aaKnown RBP9.65□□□□□ -0.86
LSM3-201ENST00000306024 SYT7O43581 403 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 TRAPPC6AO75865 159 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 GNG10P50151 68 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 SSR4P51571 173 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 NUTF2P61970 127 aaKnown RBP9.65□□□□□ -0.86
LSM3-201ENST00000306024 MGAT2Q10469 447 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 KCTD18Q6PI47 426 aaPredicted RBP9.65□□□□□ -0.86
LSM3-201ENST00000306024 FAM185AQ8N0U4 392 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 OR13C8Q8NGS7 320 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 FAM210BQ96KR6 192 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 NOL4LQ96MY1 436 aaPredicted RBP9.65□□□□□ -0.86
LSM3-201ENST00000306024 LMF2Q9BU23 707 aaKnown RBP9.65□□□□□ -0.86
LSM3-201ENST00000306024 MRPL37Q9BZE1 423 aaKnown RBP9.65□□□□□ -0.86
LSM3-201ENST00000306024 LRFN1Q9P244 771 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 BPTFQ12830 3046 aa9.65□□□□□ -0.86
LSM3-201ENST00000306024 A0A087WV48 116 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 DDAH2O95865 285 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 MPIG6BO95866 241 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 CT45A8P0DMV1 189 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 CT45A9P0DMV2 189 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 GALNSP34059 522 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 CSNK2A1P68400 391 aaPredicted RBP9.65□□□□□ -0.87
LSM3-201ENST00000306024 IGLV3-21P80748 117 aaPredicted RBP9.65□□□□□ -0.87
LSM3-201ENST00000306024 MEP1BQ16820 701 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 ALG10Q5BKT4 473 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 CT45A2Q5DJT8 189 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 DPY19L2P2Q6ZN68 376 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 LINC00696Q6ZRV3 163 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 LFNGQ8NES3 379 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 CSNK2A3Q8NEV1 391 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 PRSS27Q9BQR3 290 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 C1orf198Q9H425 327 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 FOXJ2Q9P0K8 574 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 POLR1DQ9Y2S0 133 aa9.65□□□□□ -0.87
LSM3-201ENST00000306024 CENPVL1A0A0U1RR11 272 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 F8VVB4 439 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 F8VWA3 439 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 CSTBP04080 98 aaKnown RBP9.64□□□□□ -0.87
LSM3-201ENST00000306024 SCAND1P57086 179 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 SLC35A1P78382 337 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 RNF151Q2KHN1 245 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 NPSR1Q6W5P4 371 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 FER1L6-AS2Q96M78 137 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 CD5P06127 495 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 TMEM33P57088 247 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 PRPS1P60891 318 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 SSPNQ14714 243 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 ABCA11PQ4W5N1 156 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 UNQ6494/PRO21346Q6UXR6 183 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 VASH2Q86V25 355 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 THNSL2Q86YJ6 484 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 ZNF721Q8TF20 911 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 EGLN1Q9GZT9 426 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 TUBG2Q9NRH3 451 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 SERINC1Q9NRX5 453 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 FLVCR1Q9Y5Y0 555 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 ZNF724A8MTY0 619 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 CRTAPO75718 401 aaPredicted RBP9.64□□□□□ -0.87
LSM3-201ENST00000306024 C1QL1O75973 258 aa9.64□□□□□ -0.87
LSM3-201ENST00000306024 IL33O95760 270 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms