RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ADOQ96SZ5 270 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BNQ99877 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BMQ99879 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 GAL3ST1Q99999 423 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 PHF7Q9BWX1 381 aaPredicted RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 PECRQ9BY49 303 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 PLEKHA2Q9HB19 425 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SERINC1Q9NRX5 453 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CKLFQ9UBR5 152 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 WNT16Q9UBV4 365 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CHCHD2Q9Y6H1 151 aaPredicted RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 CCDC187A0A096LP49 1063 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 DCDC2BA2VCK2 349 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 XKRYO14609 159 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 YKT6O15498 198 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SLC16A7O60669 478 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CD2P06729 351 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 DAOP14920 347 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 IL12BP29460 328 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 AKR1C3P42330 323 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CDX1P47902 265 aaPredicted RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 SULT1A1P50225 295 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 PRKXP51817 358 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 TMEM33P57088 247 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 GFI1BQ5VTD9 330 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 RPUSD3Q6P087 351 aaKnown RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 GATSQ8NAP1 163 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 METTL21AQ8WXB1 218 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 MRPL24Q96A35 216 aaKnown RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 FGGYQ96C11 551 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 IMMP1LQ96LU5 166 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 Q96M66 194 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 RARRES2Q99969 163 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 RSRP1Q9BUV0 290 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 TBL1XR1Q9BZK7 514 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SMCO4Q9NRQ5 59 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 F5H0A9 414 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 NTN3O00634 580 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 DUX1O43812 170 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 SRP19P09132 144 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 NME2P22392 152 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 NTF4P34130 210 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 PPP1CCP36873 323 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 P2RY1P47900 373 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ZNF726P1Q15940 193 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 COA6Q5JTJ3 125 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 FAM90A2PQ658T7 463 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 Q6ZS52 159 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 Q8N7P7 452 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 OR10G4Q8NGN3 311 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 M1APQ8TC57 530 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 C11orf40Q8WZ69 217 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 SPSB4Q96A44 273 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 BOD1Q96IK1 185 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 SF3B5Q9BWJ5 86 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 OR11A1Q9GZK7 315 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 TAF9BQ9HBM6 251 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ZNF391Q9UJN7 358 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 CYP8B1Q9UNU6 501 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 NOP16Q9Y3C1 178 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 TRBV23OR9-2A0A075B6M9 112 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ZNF705EA8MWA4 302 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 B4DGG1 531 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ZNF878C9JN71 531 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 PROB1E7EW31 1015 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 AP4M1O00189 453 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 YPEL1O60688 119 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 PITX3O75364 302 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 AHSA1O95433 338 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 DBHP09172 617 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 MDKP21741 143 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 CCR4P51679 360 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 UCP3P55916 312 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ADAM8P78325 824 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ENDOGQ14249 297 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 ATXN7L3Q14CW9 347 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 ARL6IP1Q15041 203 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 RHEBQ15382 184 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 EXT1Q16394 746 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 DOK3Q7L591 496 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 RD3Q7Z3Z2 195 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ZNF584Q8IVC4 421 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 KDM8Q8N371 416 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 SPEM1Q8N4L4 309 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 WDSUB1Q8N9V3 476 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 OR52M1Q8NGK5 317 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 OR5D14Q8NGL3 314 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 OR13C3Q8NGS6 347 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 OR4K15Q8NH41 348 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 MR1Q95460 341 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 C14orf79Q96F83 325 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 TGM7Q96PF1 710 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 YPEL2Q96QA6 119 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 GLRX2Q9NS18 164 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 COPS7AQ9UBW8 275 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 FARSAQ9Y285 508 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 TET2Q6N021 2002 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 IGKV1-12A0A0C4DH73 117 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 A0A1W2PPE2 198 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms