RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 IGKV1D-8A0A087WSZ0 117 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 TRAV17A0A0B4J275 112 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 HTR3BO95264 441 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 TBPP20226 339 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 BTF3P20290 206 aaKnown RBP5.65□□□□□ -1.51
USP47-201ENST00000305481 CPT2P23786 658 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 GABRR1P24046 479 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 FUT6P51993 359 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 DHRS2Q13268 280 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 ARFRP1Q13795 201 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 RSU1Q15404 277 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 TAF9Q16594 264 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 PLCXD3Q63HM9 321 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 SLC25A42Q86VD7 318 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 MYPOPQ86VE0 399 aaPredicted RBP5.65□□□□□ -1.51
USP47-201ENST00000305481 HOGA1Q86XE5 327 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 GCNT2Q8N0V5 402 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 UXS1Q8NBZ7 420 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 ADAD2Q8NCV1 583 aaKnown RBP5.65□□□□□ -1.51
USP47-201ENST00000305481 WBP1Q96G27 269 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 GMPPAQ96IJ6 420 aaPredicted RBP5.65□□□□□ -1.51
USP47-201ENST00000305481 HDHD3Q9BSH5 251 aaPredicted RBP5.65□□□□□ -1.51
USP47-201ENST00000305481 METTL9Q9H1A3 318 aa5.65□□□□□ -1.51
USP47-201ENST00000305481 UBE2QL1A1L167 161 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 ZNF891A8MT65 544 aaPredicted RBP5.64□□□□□ -1.51
USP47-201ENST00000305481 SERPINE3A8MV23 424 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 GOSR2O14653 212 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 ZBTB25P24278 435 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 PIGYQ3MUY2 71 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 LY6G6FQ5SQ64 297 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 VAX1Q5SQQ9 334 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 ZBTB37Q5TC79 503 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 ASCL5Q7RTU5 278 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 MDP1Q86V88 176 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 OR5M9Q8NGP3 310 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 APOBEC3DQ96AK3 386 aaPredicted RBP5.64□□□□□ -1.51
USP47-201ENST00000305481 PLSCR2Q9NRY7 297 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 KCNN3Q9UGI6 736 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 OPN4Q9UHM6 478 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 PLSCR5A0PG75 271 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 AQP7O14520 342 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 GEMIN2O14893 280 aaKnown RBP5.64□□□□□ -1.51
USP47-201ENST00000305481 LILRA1O75019 489 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 ZNF35P13682 527 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 IGHV1-2P23083 117 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 SSTR2P30874 369 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 SNU13P55769 128 aaKnown RBP5.64□□□□□ -1.51
USP47-201ENST00000305481 RAP2BP61225 183 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 RPUSD3Q6P087 351 aaKnown RBP5.64□□□□□ -1.51
USP47-201ENST00000305481 TFAP2EQ6VUC0 442 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 ZDHHC22Q8N966 263 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 MARCH1Q8TCQ1 289 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 CCDC107Q8WV48 283 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 HPSE2Q8WWQ2 592 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 TRIB1Q96RU8 372 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 FAAP24Q9BTP7 215 aa5.64□□□□□ -1.51
USP47-201ENST00000305481 EIF3KQ9UBQ5 218 aaKnown RBP5.64□□□□□ -1.51
USP47-201ENST00000305481 PQLC2LA1A4F0 135 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CA11O75493 328 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CSTBP04080 98 aaKnown RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 PDGFAP04085 211 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 NPBWR2P48146 333 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 ATP1B3P54709 279 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PRDX4Q13162 271 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PPP1R1AQ13522 171 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 ZMYND11Q15326 602 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 NKAPLQ5M9Q1 402 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 AADACL3Q5VUY0 350 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 BRICD5Q6PL45 260 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 FAM214BQ7L5A3 538 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 FBXL14Q8N1E6 418 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 C12orf45Q8N5I9 185 aaPredicted RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 PXT1Q8NFP0 134 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 OR13G1Q8NGZ3 307 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 OR51F2Q8NH61 342 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 TERB2Q8NHR7 220 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 EMG1Q92979 244 aaKnown RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 PLEKHJ1Q9NW61 149 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 IL36GQ9NZH8 169 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SLC7A11Q9UPY5 501 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 A0A1W2PR80 420 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 ANKRD34BA5PLL1 514 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PCP4L1A6NKN8 68 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CEACAM18A8MTB9 384 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 F8VVB4 439 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 F8VWA3 439 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SDCBPO00560 298 aaPredicted RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 TSC22D2O75157 780 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 IL2RAP01589 272 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 IFNA6P05013 189 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SERPINA5P05154 406 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 TPOP07202 933 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CELA3BP08861 270 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CHATP28329 748 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 KIR2DL2P43627 348 aaPredicted RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 CBX5P45973 191 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 DHODHQ02127 395 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 P4HA3Q7Z4N8 544 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 BATF2Q8N1L9 274 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 FTMTQ8N4E7 242 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms