RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 CHAF1BQ13112 559 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 PLEKHN1Q494U1 663 aaPredicted RBP12.39□□□□□ -0.43
RAB40A-201ENST00000304236 CRIP3Q6Q6R5 217 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 VASH2Q86V25 355 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 CSNK2A3Q8NEV1 391 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 OR10K1Q8NGX5 313 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 DMRTA2Q96SC8 542 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 OSGIN2Q9Y236 505 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 MGAQ8IWI9 3026 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 SMG1Q96Q15 3661 aaKnown RBP12.39□□□□□ -0.43
RAB40A-201ENST00000304236 LOC105371267A0A1B0GV96 52 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 C13orf42A0A1B0GVH6 325 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 C5orf63A6NC05 138 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 TAGLNQ01995 201 aaKnown RBP12.39□□□□□ -0.43
RAB40A-201ENST00000304236 ATXN7L3Q14CW9 347 aaPredicted RBP12.39□□□□□ -0.43
RAB40A-201ENST00000304236 TUSC1Q2TAM9 212 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 PAN3Q58A45 887 aaKnown RBP12.39□□□□□ -0.43
RAB40A-201ENST00000304236 C1QL2Q7Z5L3 287 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 CCDC36Q8IYA8 594 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 GPR137CQ8N3F9 429 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 RELL2Q8NC24 303 aaPredicted RBP12.39□□□□□ -0.43
RAB40A-201ENST00000304236 SEMA6DQ8NFY4 1073 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 OR5AP2Q8NGF4 316 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 EMG1Q92979 244 aaKnown RBP12.39□□□□□ -0.43
RAB40A-201ENST00000304236 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 SPSB1Q96BD6 273 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 ST6GALNAC5Q9BVH7 336 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 DDA1Q9BW61 102 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 C1QTNF6Q9BXI9 259 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 MED12Q93074 2177 aa12.39□□□□□ -0.43
RAB40A-201ENST00000304236 FIGNL2A6NMB9 653 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 F5H0A9 414 aaPredicted RBP12.38□□□□□ -0.43
RAB40A-201ENST00000304236 G3V3Y1 287 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SGCEO43556 437 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SERPINA2P20848 420 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 PRKACBP22694 351 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 B3GALT5-AS1P59052 145 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SCRN3Q0VDG4 424 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SNTB1Q13884 538 aaKnown RBP12.38□□□□□ -0.43
RAB40A-201ENST00000304236 CHRFAM7AQ494W8 412 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 CLEC18BQ6UXF7 455 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SLC38A6Q8IZM9 456 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 OR13G1Q8NGZ3 307 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 CPT1CQ8TCG5 803 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SGK3Q96BR1 496 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 FBXO17Q96EF6 278 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SRXN1Q9BYN0 137 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 WDR13Q9H1Z4 485 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 TEX13DA0A0J9YY54 714 aaPredicted RBP12.38□□□□□ -0.43
RAB40A-201ENST00000304236 HPNP05981 417 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 CRYGSP22914 178 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 CARD18P57730 90 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 CNN3Q15417 329 aaKnown RBP12.38□□□□□ -0.43
RAB40A-201ENST00000304236 SULF2Q8IWU5 870 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 OR5D18Q8NGL1 313 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 STOML3Q8TAV4 291 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 NPRL2Q8WTW4 380 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 EXTL1Q92935 676 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 RTBDNQ9BSG5 229 aaPredicted RBP12.38□□□□□ -0.43
RAB40A-201ENST00000304236 EHFQ9NZC4 300 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 ZNF391Q9UJN7 358 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
RAB40A-201ENST00000304236 CSAG2Q9Y5P2 127 aa12.38□□□□□ -0.43
RAB40A-201ENST00000304236 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 GCN1Q92616 2671 aaKnown RBP12.37□□□□□ -0.43
RAB40A-201ENST00000304236 F8VVB4 439 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 F8VWA3 439 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 SFTPCP11686 197 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 LYL1P12980 280 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 CNR1P21554 472 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 NAAAQ02083 359 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 BEX5Q5H9J7 111 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 DCAF12Q5T6F0 453 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 AADACL3Q5VUY0 350 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 STPG2Q8N412 459 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 IL22RA1Q8N6P7 574 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 PIGTQ969N2 578 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 METTL9Q9H1A3 318 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 ELL3Q9HB65 397 aaPredicted RBP12.37□□□□□ -0.43
RAB40A-201ENST00000304236 GPR160Q9UJ42 338 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 EDARQ9UNE0 448 aa12.37□□□□□ -0.43
RAB40A-201ENST00000304236 LGALS8O00214 317 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 SYNGR3O43761 229 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 DBHP09172 617 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 TPT1P13693 172 aaKnown RBP12.36□□□□□ -0.43
RAB40A-201ENST00000304236 ZNF468Q5VIY5 522 aaPredicted RBP12.36□□□□□ -0.43
RAB40A-201ENST00000304236 PLXDC2Q6UX71 529 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 SPERTQ8NA61 448 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 MRPS24Q96EL2 167 aaKnown RBP12.36□□□□□ -0.43
RAB40A-201ENST00000304236 Q96M66 194 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 ZNF75AQ96N20 296 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 FAM117AQ9C073 453 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 BARX1Q9HBU1 254 aaPredicted RBP12.36□□□□□ -0.43
RAB40A-201ENST00000304236 TMEM38BQ9NVV0 291 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 PADI1Q9ULC6 663 aa12.36□□□□□ -0.43
RAB40A-201ENST00000304236 C14orf166Q9Y224 244 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms