RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 GTF2F2P13984 249 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 GNLYP22749 145 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 CPT2P23786 658 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 PRSS3P35030 304 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 SRP9P49458 86 aaKnown RBP11.09□□□□□ -0.63
CCDC7-202ENST00000302316 TLE1Q04724 770 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 OR8G1Q15617 311 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 HAGHLQ6PII5 290 aaPredicted RBP11.09□□□□□ -0.63
CCDC7-202ENST00000302316 Q6ZTK2 550 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 ZNF573Q86YE8 665 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 LRRC46Q96FV0 321 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 NUDT16L1Q9BRJ7 211 aaKnown RBP11.09□□□□□ -0.63
CCDC7-202ENST00000302316 SLC22A4Q9H015 551 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 NGBQ9NPG2 151 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 TMEM100Q9NV29 134 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 IL36GQ9NZH8 169 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 KLK11Q9UBX7 282 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 IGSF10Q6WRI0 2623 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 hCG_2014768A0A024R1R8 64 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 ABCD4O14678 606 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 SOCS1O15524 211 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 LYRM1O43325 122 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 ORC5O43913 435 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 SFTPBP07988 381 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 GUCA2AQ02747 115 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 CDSNQ15517 529 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 IGFBP7Q16270 282 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 MSMPQ1L6U9 139 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 Q6ZNX1 250 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 GDPD3Q7L5L3 318 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 NRARPQ7Z6K4 114 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 OR10AD1Q8NGE0 317 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 SLAMF9Q96A28 289 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 RAB3CQ96E17 227 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 TM2D1Q9BX74 207 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 PCDHB16Q9NRJ7 776 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 DUSP13Q9UII6 198 aa11.09□□□□□ -0.63
CCDC7-202ENST00000302316 RBMX2Q9Y388 322 aaKnown RBP11.09□□□□□ -0.63
CCDC7-202ENST00000302316 RELNP78509 3460 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.08□□□□□ -0.64
CCDC7-202ENST00000302316 DPRXA6NFQ7 191 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 WIPF3A6NGB9 483 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 GNB3P16520 340 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 GABRR1P24046 479 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 KLF3P57682 345 aaPredicted RBP11.08□□□□□ -0.64
CCDC7-202ENST00000302316 BSPH1Q075Z2 132 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 SNTB1Q13884 538 aaKnown RBP11.08□□□□□ -0.64
CCDC7-202ENST00000302316 ZNF260Q3ZCT1 412 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 CDNFQ49AH0 187 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 SLC22A25Q6T423 547 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 MKXQ8IYA7 352 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 BATF2Q8N1L9 274 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 TMEM171Q8WVE6 324 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 AQP3Q92482 292 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 Q96M66 194 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 KCNJ16Q9NPI9 418 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 HEATR1Q9H583 2144 aaKnown RBP11.08□□□□□ -0.64
CCDC7-202ENST00000302316 MEIS3P1A6NDR6 274 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 H0YL77 283 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 MLNRO43193 412 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 SYNGR1O43759 233 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 ZNF250P15622 560 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 SPNP16150 400 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 GRNP28799 593 aaKnown RBP11.08□□□□□ -0.64
CCDC7-202ENST00000302316 NPBWR2P48146 333 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 RFX2P48378 723 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 C4orf17Q53FE4 359 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 MZT2BQ6NZ67 158 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 DNM1P46Q6ZS02 220 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 RTN4RL2Q86UN3 420 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 LRP11Q86VZ4 500 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 SAXO1Q8IYX7 474 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 OSR2Q8N2R0 312 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 FAM89BQ8N5H3 189 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 NUP37Q8NFH4 326 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 ENKURQ8TC29 256 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 OR51I2Q9H344 312 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 MSL2Q9HCI7 577 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 NKIRAS2Q9NYR9 191 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 NDRG3Q9UGV2 375 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 ELF5Q9UKW6 265 aaPredicted RBP11.08□□□□□ -0.64
CCDC7-202ENST00000302316 CACNG2Q9Y698 323 aa11.08□□□□□ -0.64
CCDC7-202ENST00000302316 SMG1Q96Q15 3661 aaKnown RBP11.07□□□□□ -0.64
CCDC7-202ENST00000302316 LRP5LA4QPB2 252 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 TRAPPC2LH3BP13 241 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 H7C417 338 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 SULT1C2O00338 296 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 RBBP9O75884 186 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 ECDO95905 644 aaPredicted RBP11.07□□□□□ -0.64
CCDC7-202ENST00000302316 LPLP06858 475 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 HIST1H1DP16402 221 aaKnown RBP11.07□□□□□ -0.64
CCDC7-202ENST00000302316 BCL3P20749 454 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 BLVRBP30043 206 aaPredicted RBP11.07□□□□□ -0.64
CCDC7-202ENST00000302316 TMEM50BP56557 158 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 AP3S2P59780 193 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 KLF9Q13886 244 aaPredicted RBP11.07□□□□□ -0.64
CCDC7-202ENST00000302316 PIGYQ3MUY2 71 aa11.07□□□□□ -0.64
CCDC7-202ENST00000302316 PLAC9Q5JTB6 97 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms