RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 FJX1Q86VR8 437 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 CALHM1Q8IU99 346 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 SAXO1Q8IYX7 474 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 TMEM229BQ8NBD8 167 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 ST6GALNAC3Q8NDV1 305 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 KLF14Q8TD94 323 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 Q96M66 194 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 CRIM1Q9NZV1 1036 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 ZGRF1Q86YA3 2104 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 TRGV8A0A0C4DH27 118 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 IQCF6A8MYZ5 107 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 INMT-MINDY4F8WBC2 141 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 CA6P23280 308 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 ZNF83P51522 516 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 CCR6P51684 374 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 GNG3P63215 75 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 CD300CQ08708 224 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 PLAC9Q5JTB6 97 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 AGAP6Q5VW22 663 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 SLC25A26Q70HW3 274 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 ZNF573Q86YE8 665 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 MKXQ8IYA7 352 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 OSR2Q8N2R0 312 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 OR8S1Q8NH09 359 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 MARS2Q96GW9 593 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 ARHGAP5-AS1Q96IT6 56 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 NUDT15Q9NV35 164 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 ELF5Q9UKW6 265 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 SPEF1Q9Y4P9 236 aa13.47□□□□□ -0.25
HERPUD1-201ENST00000300302 IGKV1-12A0A0C4DH73 117 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 C16orf97H3BN30 126 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 M0R1B8 84 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 LILRA1O75019 489 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 IGKV1D-12P01611 117 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 TMEM50BP56557 158 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 BTG1P62324 171 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 NAAAQ02083 359 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 SFRP4Q6FHJ7 346 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 STEAP1BQ6NZ63 245 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 PCSK4Q6UW60 755 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 CHAC2Q8WUX2 184 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 MICU1Q9BPX6 476 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 RTL8AQ9BWD3 113 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 IFT46Q9NQC8 304 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 JKAMPQ9P055 326 aa13.46□□□□□ -0.25
HERPUD1-201ENST00000300302 FOXI3A8MTJ6 420 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 SERPINE3A8MV23 424 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 MFNGO00587 321 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 AKR7A2O43488 359 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 DHFRP00374 187 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 CRYAAP02489 173 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 GABRR1P24046 479 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 GCH1P30793 250 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 PSG7Q13046 419 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 TATDN3Q17R31 274 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 ZNF718Q3SXZ3 478 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 ALKBH2Q6NS38 261 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 BTN2A1Q7KYR7 527 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 SSX8Q7RTT4 187 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 TMEM200AQ86VY9 491 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 OR4C16Q8NGL9 310 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 NUDCD2Q8WVJ2 157 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 DVL3Q92997 716 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 POM121Q96HA1 1249 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 DMRTA2Q96SC8 542 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 FGF23Q9GZV9 251 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 MEMO1Q9Y316 297 aa13.46□□□□□ -0.26
HERPUD1-201ENST00000300302 CHD8Q9HCK8 2581 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 ZNF736B4DX44 427 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 CD3DP04234 171 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 CALCRP30988 508 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 CBX5P45973 191 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 RAG2P55895 527 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 CARTPTQ16568 116 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 TMEM255AQ5JRV8 349 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 NCCRP1Q6ZVX7 275 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 LIX1LQ8IVB5 337 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 RELL2Q8NC24 303 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 OR10A4Q9H209 315 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 PLEKHJ1Q9NW61 149 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 KCNK7Q9Y2U2 307 aa13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 MAP1BP46821 2468 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-201ENST00000300302 TRAV6A0A075B6T7 132 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 SFTPBP07988 381 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 MPV17P39210 176 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 CA7P43166 264 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 MBNL2Q5VZF2 373 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 FAAP20Q6NZ36 180 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 ZNF782Q6ZMW2 699 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 FBXL14Q8N1E6 418 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 OR56B4Q8NH76 319 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 ADAT1Q9BUB4 502 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 PECRQ9BY49 303 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 PURGQ9UJV8 347 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 ST3GAL6Q9Y274 331 aa13.44□□□□□ -0.26
HERPUD1-201ENST00000300302 TRAPPC2LH3BP13 241 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms