RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 MICBQ29980 383 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 GLDNQ6ZMI3 551 aaPredicted RBP12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 MVB12AQ96EY5 273 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 M0QZ24 198 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 MASP2O00187 686 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CRYBA1P05813 215 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CD96P40200 585 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TFF2Q03403 129 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 PPP1R1AQ13522 171 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 SPEM1Q8N4L4 309 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 LRRC29Q8WV35 223 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TAAR3PQ9P1P4 343 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TMEFF2Q9UIK5 374 aaPredicted RBP12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 YBX2Q9Y2T7 364 aaKnown RBP12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 ACSM4P0C7M7 580 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 USF1P22415 310 aaPredicted RBP12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TMEM128Q5BJH2 165 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 FA2HQ7L5A8 372 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 OR10D3Q8NH80 312 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 SMIM4Q8WVI0 70 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 SIGLEC7Q9Y286 467 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 IGKV3-7A0A075B6H7 116 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 BMPR1BO00238 502 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 SLC17A2O00624 439 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CDKN2AP42771 156 aaKnown RBP12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 IP6K3Q96PC2 410 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 FUT3P21217 361 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CALCRP30988 508 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 ZNF574Q6ZN55 896 aaPredicted RBP12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 DGAT2L6Q6ZPD8 337 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 RPEQ96AT9 228 aa12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 HSD17B10Q99714 261 aaKnown RBP12.1□□□□□ -0.47
CHRFAM7A-201ENST00000299847 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 EDARADDQ8WWZ3 215 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CNTD2Q9H8S5 307 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 EPPINO95925 133 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 ORM2P19652 201 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 GPR3P46089 330 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TSPO2Q5TGU0 170 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 MUC20Q8N307 709 aaPredicted RBP12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 C3orf85A0A1B0GTC6 90 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CA5BP1Q8WTZ4 195 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CYC1P08574 325 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 WNT3P56703 355 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 LYZP61626 148 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 RHOBP62745 196 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 OR5C1Q8NGR4 320 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 OR1B1Q8NGR6 318 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 DPF1Q92782 380 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 AAMDCQ9H7C9 122 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 OR5AC1P0C628 307 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CHRNA7P36544 502 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CRYBB2P43320 205 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 PNLIPRP3Q17RR3 467 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 C17orf47Q8NEP4 570 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 RAB18Q9NP72 206 aa12.09□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CRXO43186 299 aaPredicted RBP12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 LIMS3P0CW19 117 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 LIMS4P0CW20 117 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 PTGFRP43088 359 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 MVDP53602 400 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 SLC38A11Q08AI6 406 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 RAB32Q13637 225 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 GUK1Q16774 197 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 TOMM20LQ6UXN7 152 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 CALHM3Q86XJ0 350 aa12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 BCL2L2Q92843 193 aaPredicted RBP12.08□□□□□ -0.47
CHRFAM7A-201ENST00000299847 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SERPINE3A8MV23 424 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MBTPS2O43462 519 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GATCO43716 136 aaKnown RBP12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PEX11BO96011 259 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FPR2P25090 351 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TPPP2P59282 170 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ERVS71-1P61550 626 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FAM109BQ6ICB4 259 aaPredicted RBP12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TGIF2LYQ8IUE0 185 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MMP24Q9Y5R2 645 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NUDT19A8MXV4 375 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CXCL10P02778 98 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GNG3P63215 75 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PAX5Q02548 391 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FNDC7Q5VTL7 733 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 UBALD2Q8IYN6 164 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NOL4LQ96MY1 436 aaPredicted RBP12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MOGAT1Q96PD6 335 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 UQCC2Q9BRT2 126 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TGOLN2O43493 480 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HIST1H1DP16402 221 aaKnown RBP12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TNFAIP6P98066 277 aaPredicted RBP12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 KMT5CQ86Y97 462 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZNF683Q8IZ20 524 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms